Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 YBX1P10-201ENST00000444752 975 ntBASIC18.7■□□□□ 0.58
CPNE3O75131 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.7■□□□□ 0.58
CPNE3O75131 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.7■□□□□ 0.58
CPNE3O75131 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE3O75131 AL020996.1-203ENST00000536896 2307 ntBASIC18.7■□□□□ 0.58
CPNE3O75131 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CPNE3O75131 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE3O75131 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CPNE3O75131 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE3O75131 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE3O75131 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE3O75131 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CPNE3O75131 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CPNE3O75131 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE3O75131 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPNE3O75131 TFP1-202ENST00000475455 1573 ntBASIC18.69■□□□□ 0.58
CPNE3O75131 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE3O75131 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPNE3O75131 KRT16P1-201ENST00000399124 1418 ntBASIC18.69■□□□□ 0.58
CPNE3O75131 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.69■□□□□ 0.58
CPNE3O75131 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE3O75131 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.69■□□□□ 0.58
CPNE3O75131 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE3O75131 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 AC018553.1-201ENST00000616682 1458 ntBASIC18.69■□□□□ 0.58
CPNE3O75131 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPNE3O75131 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE3O75131 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE3O75131 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE3O75131 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 PHGDH-210ENST00000641115 1638 ntBASIC18.68■□□□□ 0.58
CPNE3O75131 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE3O75131 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE3O75131 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.68■□□□□ 0.58
CPNE3O75131 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.68■□□□□ 0.58
CPNE3O75131 C1QL1P1-201ENST00000568105 661 ntBASIC18.68■□□□□ 0.58
CPNE3O75131 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.68■□□□□ 0.58
CPNE3O75131 CR392000.1-201ENST00000624770 1228 ntBASIC18.68■□□□□ 0.58
CPNE3O75131 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE3O75131 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPNE3O75131 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPNE3O75131 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE3O75131 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE3O75131 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE3O75131 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE3O75131 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CPNE3O75131 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.67■□□□□ 0.58
CPNE3O75131 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.67■□□□□ 0.58
CPNE3O75131 FAM210CP-201ENST00000445714 574 ntBASIC18.67■□□□□ 0.58
CPNE3O75131 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
CPNE3O75131 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE3O75131 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CPNE3O75131 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE3O75131 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE3O75131 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CPNE3O75131 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE3O75131 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE3O75131 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 LINC01006-201ENST00000333319 2292 ntBASIC18.66■□□□□ 0.58
CPNE3O75131 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms