Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.87■□□□□ 0.61
CDX4O14627 CR769767.2-201ENST00000622735 460 ntBASIC18.87■□□□□ 0.61
CDX4O14627 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDX4O14627 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.86■□□□□ 0.61
CDX4O14627 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.86■□□□□ 0.61
CDX4O14627 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDX4O14627 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX4O14627 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX4O14627 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX4O14627 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.86■□□□□ 0.61
CDX4O14627 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.86■□□□□ 0.61
CDX4O14627 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDX4O14627 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.86■□□□□ 0.61
CDX4O14627 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.86■□□□□ 0.61
CDX4O14627 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX4O14627 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.85■□□□□ 0.61
CDX4O14627 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDX4O14627 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
CDX4O14627 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.85■□□□□ 0.61
CDX4O14627 KRT17P6-201ENST00000453795 1220 ntBASIC18.85■□□□□ 0.61
CDX4O14627 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.85■□□□□ 0.61
CDX4O14627 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDX4O14627 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CDX4O14627 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX4O14627 AC092329.2-201ENST00000598402 547 ntBASIC18.85■□□□□ 0.61
CDX4O14627 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.85■□□□□ 0.61
CDX4O14627 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDX4O14627 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.85■□□□□ 0.61
CDX4O14627 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDX4O14627 KRT8P41-201ENST00000533985 1514 ntBASIC18.84■□□□□ 0.61
CDX4O14627 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
CDX4O14627 LINC01465-201ENST00000408887 1940 ntBASIC18.84■□□□□ 0.61
CDX4O14627 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 AC004870.1-201ENST00000315132 882 ntBASIC18.84■□□□□ 0.61
CDX4O14627 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CDX4O14627 UNC93B7-201ENST00000509439 705 ntBASIC18.84■□□□□ 0.61
CDX4O14627 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.84■□□□□ 0.61
CDX4O14627 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.84■□□□□ 0.61
CDX4O14627 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.84■□□□□ 0.61
CDX4O14627 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDX4O14627 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.84■□□□□ 0.61
CDX4O14627 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDX4O14627 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.84■□□□□ 0.61
CDX4O14627 FBXW4P1-201ENST00000426721 2239 ntBASIC18.84■□□□□ 0.61
CDX4O14627 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDX4O14627 KRT8P10-201ENST00000450021 1447 ntBASIC18.83■□□□□ 0.61
CDX4O14627 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.83■□□□□ 0.61
CDX4O14627 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.83■□□□□ 0.61
CDX4O14627 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CDX4O14627 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDX4O14627 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDX4O14627 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDX4O14627 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDX4O14627 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDX4O14627 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
CDX4O14627 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDX4O14627 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDX4O14627 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDX4O14627 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.83■□□□□ 0.6
CDX4O14627 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.83■□□□□ 0.6
CDX4O14627 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.83■□□□□ 0.6
CDX4O14627 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.83■□□□□ 0.6
CDX4O14627 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.83■□□□□ 0.6
CDX4O14627 AC111152.3-201ENST00000569699 673 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms