Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 AC004967.1-201ENST00000453589 447 ntBASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC85CA6NKD9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 AC009065.1-201ENST00000564055 1225 ntBASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 MIR3687-2-201ENST00000577708 61 ntBASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 MIR3687-1-201ENST00000614492 61 ntBASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC85CA6NKD9 LINC00167-201ENST00000530583 1419 ntBASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 REXO1L6P-202ENST00000619970 1078 ntBASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC85CA6NKD9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 GPX1P2-201ENST00000429271 606 ntBASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 AF186996.4-201ENST00000467186 377 ntBASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 AC148477.8-201ENST00000624298 468 ntBASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC85CA6NKD9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC85CA6NKD9 PTBP1P-201ENST00000554374 1601 ntBASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 KRT18P67-201ENST00000432816 1264 ntBASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC85CA6NKD9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 AC112482.1-201ENST00000492080 688 ntBASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 AC134684.3-201ENST00000641758 218 ntBASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC85CA6NKD9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC85CA6NKD9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC85CA6NKD9 COX20P2-201ENST00000452636 358 ntBASIC21.68■■□□□ 1.06
CCDC85CA6NKD9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC85CA6NKD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC85CA6NKD9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms