Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV9S1A1TA0A576 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TCRBV9S1A1TA0A576 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBV9S1A1TA0A576 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC022517.1-201ENST00000592429 346 ntBASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 ZNF815P-204ENST00000434898 1737 ntBASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC006333.2-201ENST00000607957 2099 ntBASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TCRBV9S1A1TA0A576 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 MKRN4P-201ENST00000444706 1521 ntBASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV9S1A1TA0A576 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV9S1A1TA0A576 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms