Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MIR638-201ENST00000385237 100 ntBASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AL162412.1-201ENST00000567129 965 ntBASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AC026471.1-201ENST00000564629 3026 ntBASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AL161938.1-201ENST00000569833 2180 ntBASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AC104581.1-202ENST00000635932 2618 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 KRT18P68-201ENST00000392293 1000 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 RARRES2P4-201ENST00000514074 484 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 MFSD11-216ENST00000590393 1141 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 AC105020.6-201ENST00000621523 1217 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 AC013268.1-206ENST00000638368 961 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 AC112229.1-201ENST00000639295 961 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 HCG11-201ENST00000411553 5696 ntBASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV5A0A0B4J249 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 AC007322.4-201ENST00000509611 723 ntBASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV5A0A0B4J249 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms