Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa5Q9D7I0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Shisa5Q9D7I0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa5Q9D7I0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Shisa5Q9D7I0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shisa5Q9D7I0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Shisa5Q9D7I0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.44■■□□□ 1.02
Shisa5Q9D7I0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa5Q9D7I0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa5Q9D7I0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.42■■□□□ 1.02
Shisa5Q9D7I0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa5Q9D7I0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa5Q9D7I0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa5Q9D7I0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
Shisa5Q9D7I0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.39■■□□□ 1.01
Shisa5Q9D7I0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Shisa5Q9D7I0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa5Q9D7I0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.38■■□□□ 1.01
Shisa5Q9D7I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Shisa5Q9D7I0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Shisa5Q9D7I0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa5Q9D7I0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa5Q9D7I0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa5Q9D7I0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.35■■□□□ 1.01
Shisa5Q9D7I0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa5Q9D7I0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Shisa5Q9D7I0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa5Q9D7I0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Shisa5Q9D7I0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa5Q9D7I0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1
Shisa5Q9D7I0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa5Q9D7I0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shisa5Q9D7I0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa5Q9D7I0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shisa5Q9D7I0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa5Q9D7I0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa5Q9D7I0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.29■■□□□ 1
Shisa5Q9D7I0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.29■■□□□ 1
Shisa5Q9D7I0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.29■■□□□ 1
Shisa5Q9D7I0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa5Q9D7I0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shisa5Q9D7I0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shisa5Q9D7I0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.28■■□□□ 1
Shisa5Q9D7I0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shisa5Q9D7I0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.27■■□□□ 1
Shisa5Q9D7I0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shisa5Q9D7I0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa5Q9D7I0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Shisa5Q9D7I0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa5Q9D7I0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa5Q9D7I0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Shisa5Q9D7I0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa5Q9D7I0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.23■□□□□ 0.99
Shisa5Q9D7I0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Shisa5Q9D7I0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Shisa5Q9D7I0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa5Q9D7I0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa5Q9D7I0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Shisa5Q9D7I0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Shisa5Q9D7I0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Shisa5Q9D7I0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shisa5Q9D7I0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shisa5Q9D7I0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shisa5Q9D7I0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shisa5Q9D7I0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Shisa5Q9D7I0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shisa5Q9D7I0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Shisa5Q9D7I0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.15■□□□□ 0.98
Shisa5Q9D7I0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shisa5Q9D7I0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shisa5Q9D7I0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Shisa5Q9D7I0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Shisa5Q9D7I0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa5Q9D7I0 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.13■□□□□ 0.97
Shisa5Q9D7I0 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.13■□□□□ 0.97
Shisa5Q9D7I0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.13■□□□□ 0.97
Shisa5Q9D7I0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Shisa5Q9D7I0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa5Q9D7I0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa5Q9D7I0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shisa5Q9D7I0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shisa5Q9D7I0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms