Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hcfc1r1Q9CYQ5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Hcfc1r1Q9CYQ5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hcfc1r1Q9CYQ5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcfc1r1Q9CYQ5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcfc1r1Q9CYQ5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcfc1r1Q9CYQ5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcfc1r1Q9CYQ5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcfc1r1Q9CYQ5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hcfc1r1Q9CYQ5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.38■□□□□ 0.85
Hcfc1r1Q9CYQ5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcfc1r1Q9CYQ5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1r1Q9CYQ5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1r1Q9CYQ5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1r1Q9CYQ5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1r1Q9CYQ5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Hcfc1r1Q9CYQ5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcfc1r1Q9CYQ5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hcfc1r1Q9CYQ5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc1r1Q9CYQ5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc1r1Q9CYQ5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc1r1Q9CYQ5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc1r1Q9CYQ5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc1r1Q9CYQ5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcfc1r1Q9CYQ5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcfc1r1Q9CYQ5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hcfc1r1Q9CYQ5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hcfc1r1Q9CYQ5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hcfc1r1Q9CYQ5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1r1Q9CYQ5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1r1Q9CYQ5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1r1Q9CYQ5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hcfc1r1Q9CYQ5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1r1Q9CYQ5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc1r1Q9CYQ5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcfc1r1Q9CYQ5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcfc1r1Q9CYQ5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcfc1r1Q9CYQ5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcfc1r1Q9CYQ5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Hcfc1r1Q9CYQ5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcfc1r1Q9CYQ5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcfc1r1Q9CYQ5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hcfc1r1Q9CYQ5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc1r1Q9CYQ5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc1r1Q9CYQ5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc1r1Q9CYQ5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Hcfc1r1Q9CYQ5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcfc1r1Q9CYQ5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcfc1r1Q9CYQ5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Hcfc1r1Q9CYQ5 Gm16148-201ENSMUST00000119653 893 ntBASIC20.28■□□□□ 0.84
Hcfc1r1Q9CYQ5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcfc1r1Q9CYQ5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1r1Q9CYQ5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hcfc1r1Q9CYQ5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1r1Q9CYQ5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.27■□□□□ 0.84
Hcfc1r1Q9CYQ5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcfc1r1Q9CYQ5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Hcfc1r1Q9CYQ5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcfc1r1Q9CYQ5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 Gm24804-201ENSMUST00000174982 85 ntBASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hcfc1r1Q9CYQ5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1r1Q9CYQ5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1r1Q9CYQ5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1r1Q9CYQ5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.24■□□□□ 0.83
Hcfc1r1Q9CYQ5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1r1Q9CYQ5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcfc1r1Q9CYQ5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hcfc1r1Q9CYQ5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hcfc1r1Q9CYQ5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hcfc1r1Q9CYQ5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hcfc1r1Q9CYQ5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.22■□□□□ 0.83
Hcfc1r1Q9CYQ5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hcfc1r1Q9CYQ5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hcfc1r1Q9CYQ5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hcfc1r1Q9CYQ5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1r1Q9CYQ5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1r1Q9CYQ5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1r1Q9CYQ5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1r1Q9CYQ5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1r1Q9CYQ5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hcfc1r1Q9CYQ5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Hcfc1r1Q9CYQ5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hcfc1r1Q9CYQ5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hcfc1r1Q9CYQ5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.17■□□□□ 0.82
Hcfc1r1Q9CYQ5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hcfc1r1Q9CYQ5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc1r1Q9CYQ5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hcfc1r1Q9CYQ5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms