Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhac1Q91Y10 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.85■■□□□ 1.09
Pcdhac1Q91Y10 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhac1Q91Y10 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhac1Q91Y10 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhac1Q91Y10 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhac1Q91Y10 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhac1Q91Y10 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcdhac1Q91Y10 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhac1Q91Y10 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhac1Q91Y10 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhac1Q91Y10 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhac1Q91Y10 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhac1Q91Y10 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhac1Q91Y10 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhac1Q91Y10 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhac1Q91Y10 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhac1Q91Y10 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhac1Q91Y10 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhac1Q91Y10 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhac1Q91Y10 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhac1Q91Y10 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhac1Q91Y10 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhac1Q91Y10 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhac1Q91Y10 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhac1Q91Y10 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Pcdhac1Q91Y10 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhac1Q91Y10 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhac1Q91Y10 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhac1Q91Y10 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhac1Q91Y10 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhac1Q91Y10 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.75■■□□□ 1.07
Pcdhac1Q91Y10 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhac1Q91Y10 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhac1Q91Y10 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhac1Q91Y10 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhac1Q91Y10 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhac1Q91Y10 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhac1Q91Y10 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.71■■□□□ 1.07
Pcdhac1Q91Y10 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac1Q91Y10 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac1Q91Y10 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac1Q91Y10 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhac1Q91Y10 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhac1Q91Y10 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhac1Q91Y10 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.7■■□□□ 1.06
Pcdhac1Q91Y10 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhac1Q91Y10 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhac1Q91Y10 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac1Q91Y10 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac1Q91Y10 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac1Q91Y10 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac1Q91Y10 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhac1Q91Y10 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhac1Q91Y10 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcdhac1Q91Y10 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhac1Q91Y10 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac1Q91Y10 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhac1Q91Y10 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhac1Q91Y10 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhac1Q91Y10 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Pcdhac1Q91Y10 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac1Q91Y10 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac1Q91Y10 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhac1Q91Y10 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac1Q91Y10 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac1Q91Y10 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac1Q91Y10 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac1Q91Y10 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdhac1Q91Y10 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhac1Q91Y10 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhac1Q91Y10 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhac1Q91Y10 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhac1Q91Y10 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhac1Q91Y10 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhac1Q91Y10 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhac1Q91Y10 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhac1Q91Y10 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac1Q91Y10 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac1Q91Y10 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac1Q91Y10 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac1Q91Y10 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac1Q91Y10 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhac1Q91Y10 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac1Q91Y10 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhac1Q91Y10 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhac1Q91Y10 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhac1Q91Y10 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms