Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.72■■□□□ 1.07
H2afjQ8R1M2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
H2afjQ8R1M2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
H2afjQ8R1M2 Gm45855-201ENSMUST00000212546 880 ntBASIC21.7■■□□□ 1.06
H2afjQ8R1M2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afjQ8R1M2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
H2afjQ8R1M2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2afjQ8R1M2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2afjQ8R1M2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2afjQ8R1M2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H2afjQ8R1M2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afjQ8R1M2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afjQ8R1M2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
H2afjQ8R1M2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.65■■□□□ 1.06
H2afjQ8R1M2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2afjQ8R1M2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H2afjQ8R1M2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.62■■□□□ 1.05
H2afjQ8R1M2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afjQ8R1M2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afjQ8R1M2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
H2afjQ8R1M2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afjQ8R1M2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.59■■□□□ 1.05
H2afjQ8R1M2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2afjQ8R1M2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2afjQ8R1M2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
H2afjQ8R1M2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afjQ8R1M2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afjQ8R1M2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
H2afjQ8R1M2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
H2afjQ8R1M2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afjQ8R1M2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.57■■□□□ 1.04
H2afjQ8R1M2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afjQ8R1M2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H2afjQ8R1M2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afjQ8R1M2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afjQ8R1M2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afjQ8R1M2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
H2afjQ8R1M2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
H2afjQ8R1M2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
H2afjQ8R1M2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afjQ8R1M2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afjQ8R1M2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afjQ8R1M2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2afjQ8R1M2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2afjQ8R1M2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H2afjQ8R1M2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
H2afjQ8R1M2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.43■■□□□ 1.02
H2afjQ8R1M2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afjQ8R1M2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afjQ8R1M2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms