Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.97■■■□□ 2.39
Col23a1Q8K4G2 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.96■■■□□ 2.39
Col23a1Q8K4G2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col23a1Q8K4G2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col23a1Q8K4G2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Col23a1Q8K4G2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Col23a1Q8K4G2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col23a1Q8K4G2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Col23a1Q8K4G2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.94■■■□□ 2.38
Col23a1Q8K4G2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col23a1Q8K4G2 Gm14523-201ENSMUST00000117260 558 ntBASIC29.93■■■□□ 2.38
Col23a1Q8K4G2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Col23a1Q8K4G2 Gm5812-201ENSMUST00000061073 957 ntBASIC29.92■■■□□ 2.38
Col23a1Q8K4G2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Col23a1Q8K4G2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC29.91■■■□□ 2.38
Col23a1Q8K4G2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Col23a1Q8K4G2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Col23a1Q8K4G2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC29.9■■■□□ 2.38
Col23a1Q8K4G2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Col23a1Q8K4G2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col23a1Q8K4G2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col23a1Q8K4G2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col23a1Q8K4G2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col23a1Q8K4G2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
Col23a1Q8K4G2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Col23a1Q8K4G2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.86■■■□□ 2.37
Col23a1Q8K4G2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col23a1Q8K4G2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col23a1Q8K4G2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.85■■■□□ 2.37
Col23a1Q8K4G2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Col23a1Q8K4G2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col23a1Q8K4G2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col23a1Q8K4G2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col23a1Q8K4G2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col23a1Q8K4G2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col23a1Q8K4G2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col23a1Q8K4G2 Gm5067-201ENSMUST00000170449 1009 ntBASIC29.81■■■□□ 2.36
Col23a1Q8K4G2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col23a1Q8K4G2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Col23a1Q8K4G2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col23a1Q8K4G2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Col23a1Q8K4G2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col23a1Q8K4G2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29.76■■■□□ 2.35
Col23a1Q8K4G2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Col23a1Q8K4G2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
Col23a1Q8K4G2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
Col23a1Q8K4G2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col23a1Q8K4G2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29.73■■■□□ 2.35
Col23a1Q8K4G2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Col23a1Q8K4G2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Col23a1Q8K4G2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col23a1Q8K4G2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.71■■■□□ 2.35
Col23a1Q8K4G2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Col23a1Q8K4G2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Col23a1Q8K4G2 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.71■■■□□ 2.35
Col23a1Q8K4G2 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.7■■■□□ 2.35
Col23a1Q8K4G2 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.69■■■□□ 2.34
Col23a1Q8K4G2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col23a1Q8K4G2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC29.68■■■□□ 2.34
Col23a1Q8K4G2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col23a1Q8K4G2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Col23a1Q8K4G2 Gm37136-201ENSMUST00000194368 194 ntBASIC29.68■■■□□ 2.34
Col23a1Q8K4G2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col23a1Q8K4G2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Col23a1Q8K4G2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Col23a1Q8K4G2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Col23a1Q8K4G2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col23a1Q8K4G2 Gm5921-201ENSMUST00000075898 882 ntBASIC29.67■■■□□ 2.34
Col23a1Q8K4G2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col23a1Q8K4G2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Col23a1Q8K4G2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Col23a1Q8K4G2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col23a1Q8K4G2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col23a1Q8K4G2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col23a1Q8K4G2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Col23a1Q8K4G2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC29.64■■■□□ 2.34
Col23a1Q8K4G2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Col23a1Q8K4G2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Col23a1Q8K4G2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Col23a1Q8K4G2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.63■■■□□ 2.33
Col23a1Q8K4G2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC29.62■■■□□ 2.33
Col23a1Q8K4G2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Col23a1Q8K4G2 Gm10420-201ENSMUST00000121713 882 ntBASIC29.61■■■□□ 2.33
Col23a1Q8K4G2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Col23a1Q8K4G2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Gm15546-201ENSMUST00000122095 826 ntBASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Gm9910-201ENSMUST00000195385 1550 ntBASIC29.6■■■□□ 2.33
Col23a1Q8K4G2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col23a1Q8K4G2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col23a1Q8K4G2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Col23a1Q8K4G2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.58■■■□□ 2.33
Col23a1Q8K4G2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Col23a1Q8K4G2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Col23a1Q8K4G2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Col23a1Q8K4G2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms