Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp28Q8CGV8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp28Q8CGV8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp28Q8CGV8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.93■□□□□ 0.78
Mmp28Q8CGV8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp28Q8CGV8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp28Q8CGV8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp28Q8CGV8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp28Q8CGV8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp28Q8CGV8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp28Q8CGV8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp28Q8CGV8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Mmp28Q8CGV8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.89■□□□□ 0.77
Mmp28Q8CGV8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Mmp28Q8CGV8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Mmp28Q8CGV8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp28Q8CGV8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp28Q8CGV8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp28Q8CGV8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Mmp28Q8CGV8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp28Q8CGV8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Mmp28Q8CGV8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp28Q8CGV8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp28Q8CGV8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp28Q8CGV8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Mmp28Q8CGV8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp28Q8CGV8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp28Q8CGV8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mmp28Q8CGV8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.85■□□□□ 0.77
Mmp28Q8CGV8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp28Q8CGV8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp28Q8CGV8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp28Q8CGV8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp28Q8CGV8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp28Q8CGV8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp28Q8CGV8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp28Q8CGV8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp28Q8CGV8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp28Q8CGV8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp28Q8CGV8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.83■□□□□ 0.76
Mmp28Q8CGV8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp28Q8CGV8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.82■□□□□ 0.76
Mmp28Q8CGV8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp28Q8CGV8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp28Q8CGV8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Gm16148-201ENSMUST00000119653 893 ntBASIC19.79■□□□□ 0.76
Mmp28Q8CGV8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp28Q8CGV8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.78■□□□□ 0.76
Mmp28Q8CGV8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp28Q8CGV8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp28Q8CGV8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp28Q8CGV8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp28Q8CGV8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Mmp28Q8CGV8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp28Q8CGV8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Mmp28Q8CGV8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp28Q8CGV8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Mmp28Q8CGV8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp28Q8CGV8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp28Q8CGV8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp28Q8CGV8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp28Q8CGV8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp28Q8CGV8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.75■□□□□ 0.75
Mmp28Q8CGV8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.75■□□□□ 0.75
Mmp28Q8CGV8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp28Q8CGV8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp28Q8CGV8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp28Q8CGV8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.74■□□□□ 0.75
Mmp28Q8CGV8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms