Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.92■■□□□ 1.1
Lcmt2Q8BYR1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Lcmt2Q8BYR1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.92■■□□□ 1.1
Lcmt2Q8BYR1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.92■■□□□ 1.1
Lcmt2Q8BYR1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lcmt2Q8BYR1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lcmt2Q8BYR1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lcmt2Q8BYR1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lcmt2Q8BYR1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lcmt2Q8BYR1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lcmt2Q8BYR1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lcmt2Q8BYR1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.88■■□□□ 1.09
Lcmt2Q8BYR1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lcmt2Q8BYR1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lcmt2Q8BYR1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.85■■□□□ 1.09
Lcmt2Q8BYR1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lcmt2Q8BYR1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lcmt2Q8BYR1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.84■■□□□ 1.09
Lcmt2Q8BYR1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lcmt2Q8BYR1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lcmt2Q8BYR1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.83■■□□□ 1.09
Lcmt2Q8BYR1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lcmt2Q8BYR1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lcmt2Q8BYR1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lcmt2Q8BYR1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lcmt2Q8BYR1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.82■■□□□ 1.08
Lcmt2Q8BYR1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lcmt2Q8BYR1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lcmt2Q8BYR1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lcmt2Q8BYR1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lcmt2Q8BYR1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lcmt2Q8BYR1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lcmt2Q8BYR1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lcmt2Q8BYR1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lcmt2Q8BYR1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lcmt2Q8BYR1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lcmt2Q8BYR1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lcmt2Q8BYR1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lcmt2Q8BYR1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lcmt2Q8BYR1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lcmt2Q8BYR1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lcmt2Q8BYR1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lcmt2Q8BYR1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.78■■□□□ 1.08
Lcmt2Q8BYR1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Lcmt2Q8BYR1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lcmt2Q8BYR1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lcmt2Q8BYR1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Lcmt2Q8BYR1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lcmt2Q8BYR1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.76■■□□□ 1.07
Lcmt2Q8BYR1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lcmt2Q8BYR1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Lcmt2Q8BYR1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lcmt2Q8BYR1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lcmt2Q8BYR1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lcmt2Q8BYR1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lcmt2Q8BYR1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lcmt2Q8BYR1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lcmt2Q8BYR1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lcmt2Q8BYR1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Lcmt2Q8BYR1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lcmt2Q8BYR1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lcmt2Q8BYR1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.73■■□□□ 1.07
Lcmt2Q8BYR1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lcmt2Q8BYR1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lcmt2Q8BYR1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lcmt2Q8BYR1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lcmt2Q8BYR1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lcmt2Q8BYR1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lcmt2Q8BYR1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lcmt2Q8BYR1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.7■■□□□ 1.06
Lcmt2Q8BYR1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Lcmt2Q8BYR1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lcmt2Q8BYR1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.7■■□□□ 1.06
Lcmt2Q8BYR1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.69■■□□□ 1.06
Lcmt2Q8BYR1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lcmt2Q8BYR1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lcmt2Q8BYR1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lcmt2Q8BYR1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lcmt2Q8BYR1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lcmt2Q8BYR1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lcmt2Q8BYR1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lcmt2Q8BYR1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Lcmt2Q8BYR1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lcmt2Q8BYR1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Lcmt2Q8BYR1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lcmt2Q8BYR1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lcmt2Q8BYR1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lcmt2Q8BYR1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lcmt2Q8BYR1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lcmt2Q8BYR1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lcmt2Q8BYR1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lcmt2Q8BYR1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lcmt2Q8BYR1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lcmt2Q8BYR1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms