Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptpn7Q8BUM3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Ptpn7Q8BUM3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptpn7Q8BUM3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ptpn7Q8BUM3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ptpn7Q8BUM3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.89■■□□□ 1.09
Ptpn7Q8BUM3 Gm45855-201ENSMUST00000212546 880 ntBASIC21.89■■□□□ 1.09
Ptpn7Q8BUM3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptpn7Q8BUM3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.88■■□□□ 1.09
Ptpn7Q8BUM3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptpn7Q8BUM3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptpn7Q8BUM3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptpn7Q8BUM3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptpn7Q8BUM3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.87■■□□□ 1.09
Ptpn7Q8BUM3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptpn7Q8BUM3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Ptpn7Q8BUM3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptpn7Q8BUM3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptpn7Q8BUM3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptpn7Q8BUM3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptpn7Q8BUM3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptpn7Q8BUM3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptpn7Q8BUM3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Ptpn7Q8BUM3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptpn7Q8BUM3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptpn7Q8BUM3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.82■■□□□ 1.08
Ptpn7Q8BUM3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptpn7Q8BUM3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptpn7Q8BUM3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptpn7Q8BUM3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptpn7Q8BUM3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptpn7Q8BUM3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.8■■□□□ 1.08
Ptpn7Q8BUM3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptpn7Q8BUM3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptpn7Q8BUM3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptpn7Q8BUM3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ptpn7Q8BUM3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptpn7Q8BUM3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ptpn7Q8BUM3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ptpn7Q8BUM3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Ptpn7Q8BUM3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptpn7Q8BUM3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptpn7Q8BUM3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.75■■□□□ 1.07
Ptpn7Q8BUM3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ptpn7Q8BUM3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptpn7Q8BUM3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptpn7Q8BUM3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptpn7Q8BUM3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ptpn7Q8BUM3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptpn7Q8BUM3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptpn7Q8BUM3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptpn7Q8BUM3 Gm30023-201ENSMUST00000197970 889 ntBASIC21.71■■□□□ 1.07
Ptpn7Q8BUM3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ptpn7Q8BUM3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptpn7Q8BUM3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptpn7Q8BUM3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ptpn7Q8BUM3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn7Q8BUM3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ptpn7Q8BUM3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn7Q8BUM3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptpn7Q8BUM3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptpn7Q8BUM3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.69■■□□□ 1.06
Ptpn7Q8BUM3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ptpn7Q8BUM3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.69■■□□□ 1.06
Ptpn7Q8BUM3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptpn7Q8BUM3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptpn7Q8BUM3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptpn7Q8BUM3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptpn7Q8BUM3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptpn7Q8BUM3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptpn7Q8BUM3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptpn7Q8BUM3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptpn7Q8BUM3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptpn7Q8BUM3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptpn7Q8BUM3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptpn7Q8BUM3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptpn7Q8BUM3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ptpn7Q8BUM3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptpn7Q8BUM3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptpn7Q8BUM3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptpn7Q8BUM3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptpn7Q8BUM3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms