Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rab11fip4Q8BQP8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rab11fip4Q8BQP8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rab11fip4Q8BQP8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Rab11fip4Q8BQP8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Rab11fip4Q8BQP8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rab11fip4Q8BQP8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.97■■□□□ 1.75
Rab11fip4Q8BQP8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Rab11fip4Q8BQP8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rab11fip4Q8BQP8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rab11fip4Q8BQP8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Rab11fip4Q8BQP8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rab11fip4Q8BQP8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rab11fip4Q8BQP8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rab11fip4Q8BQP8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Rab11fip4Q8BQP8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rab11fip4Q8BQP8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
Rab11fip4Q8BQP8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.94■■□□□ 1.74
Rab11fip4Q8BQP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rab11fip4Q8BQP8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rab11fip4Q8BQP8 Gm11599-201ENSMUST00000118720 878 ntBASIC25.93■■□□□ 1.74
Rab11fip4Q8BQP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rab11fip4Q8BQP8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Rab11fip4Q8BQP8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.92■■□□□ 1.74
Rab11fip4Q8BQP8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.92■■□□□ 1.74
Rab11fip4Q8BQP8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rab11fip4Q8BQP8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rab11fip4Q8BQP8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rab11fip4Q8BQP8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.91■■□□□ 1.74
Rab11fip4Q8BQP8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.9■■□□□ 1.74
Rab11fip4Q8BQP8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rab11fip4Q8BQP8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rab11fip4Q8BQP8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Rab11fip4Q8BQP8 Gm30023-201ENSMUST00000197970 889 ntBASIC25.88■■□□□ 1.73
Rab11fip4Q8BQP8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.88■■□□□ 1.73
Rab11fip4Q8BQP8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rab11fip4Q8BQP8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rab11fip4Q8BQP8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Rab11fip4Q8BQP8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.86■■□□□ 1.73
Rab11fip4Q8BQP8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rab11fip4Q8BQP8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rab11fip4Q8BQP8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Rab11fip4Q8BQP8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.85■■□□□ 1.73
Rab11fip4Q8BQP8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rab11fip4Q8BQP8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Rab11fip4Q8BQP8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Rab11fip4Q8BQP8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rab11fip4Q8BQP8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.84■■□□□ 1.73
Rab11fip4Q8BQP8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rab11fip4Q8BQP8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rab11fip4Q8BQP8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.83■■□□□ 1.72
Rab11fip4Q8BQP8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Rab11fip4Q8BQP8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rab11fip4Q8BQP8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.82■■□□□ 1.72
Rab11fip4Q8BQP8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Rab11fip4Q8BQP8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.81■■□□□ 1.72
Rab11fip4Q8BQP8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rab11fip4Q8BQP8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rab11fip4Q8BQP8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
Rab11fip4Q8BQP8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rab11fip4Q8BQP8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.79■■□□□ 1.72
Rab11fip4Q8BQP8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rab11fip4Q8BQP8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Rab11fip4Q8BQP8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rab11fip4Q8BQP8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rab11fip4Q8BQP8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rab11fip4Q8BQP8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rab11fip4Q8BQP8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rab11fip4Q8BQP8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rab11fip4Q8BQP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rab11fip4Q8BQP8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.77■■□□□ 1.72
Rab11fip4Q8BQP8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rab11fip4Q8BQP8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rab11fip4Q8BQP8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Rab11fip4Q8BQP8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.74■■□□□ 1.71
Rab11fip4Q8BQP8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Rab11fip4Q8BQP8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rab11fip4Q8BQP8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Rab11fip4Q8BQP8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rab11fip4Q8BQP8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rab11fip4Q8BQP8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.72■■□□□ 1.71
Rab11fip4Q8BQP8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rab11fip4Q8BQP8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rab11fip4Q8BQP8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rab11fip4Q8BQP8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Rab11fip4Q8BQP8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.71■■□□□ 1.71
Rab11fip4Q8BQP8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rab11fip4Q8BQP8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.69■■□□□ 1.7
Rab11fip4Q8BQP8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Rab11fip4Q8BQP8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rab11fip4Q8BQP8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rab11fip4Q8BQP8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.68■■□□□ 1.7
Rab11fip4Q8BQP8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.67■■□□□ 1.7
Rab11fip4Q8BQP8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.67■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms