Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sfr1Q8BP27 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Sfr1Q8BP27 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sfr1Q8BP27 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sfr1Q8BP27 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sfr1Q8BP27 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Sfr1Q8BP27 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sfr1Q8BP27 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sfr1Q8BP27 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sfr1Q8BP27 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sfr1Q8BP27 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Sfr1Q8BP27 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Sfr1Q8BP27 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sfr1Q8BP27 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sfr1Q8BP27 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Sfr1Q8BP27 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.84■■□□□ 1.41
Sfr1Q8BP27 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sfr1Q8BP27 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Sfr1Q8BP27 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sfr1Q8BP27 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sfr1Q8BP27 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sfr1Q8BP27 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sfr1Q8BP27 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Sfr1Q8BP27 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.81■■□□□ 1.4
Sfr1Q8BP27 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.81■■□□□ 1.4
Sfr1Q8BP27 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sfr1Q8BP27 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sfr1Q8BP27 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sfr1Q8BP27 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sfr1Q8BP27 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Sfr1Q8BP27 Gm7432-201ENSMUST00000210343 879 ntBASIC23.78■■□□□ 1.4
Sfr1Q8BP27 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Sfr1Q8BP27 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sfr1Q8BP27 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sfr1Q8BP27 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sfr1Q8BP27 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Sfr1Q8BP27 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.76■■□□□ 1.39
Sfr1Q8BP27 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sfr1Q8BP27 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sfr1Q8BP27 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sfr1Q8BP27 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sfr1Q8BP27 Particl-201ENSMUST00000205370 1560 ntBASIC23.74■■□□□ 1.39
Sfr1Q8BP27 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sfr1Q8BP27 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.74■■□□□ 1.39
Sfr1Q8BP27 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sfr1Q8BP27 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
Sfr1Q8BP27 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Sfr1Q8BP27 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Sfr1Q8BP27 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.71■■□□□ 1.39
Sfr1Q8BP27 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sfr1Q8BP27 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Sfr1Q8BP27 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.69■■□□□ 1.38
Sfr1Q8BP27 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sfr1Q8BP27 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.68■■□□□ 1.38
Sfr1Q8BP27 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.68■■□□□ 1.38
Sfr1Q8BP27 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.67■■□□□ 1.38
Sfr1Q8BP27 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sfr1Q8BP27 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sfr1Q8BP27 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sfr1Q8BP27 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sfr1Q8BP27 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sfr1Q8BP27 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Sfr1Q8BP27 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Sfr1Q8BP27 Gm11599-201ENSMUST00000118720 878 ntBASIC23.64■■□□□ 1.37
Sfr1Q8BP27 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Sfr1Q8BP27 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.63■■□□□ 1.37
Sfr1Q8BP27 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Sfr1Q8BP27 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Sfr1Q8BP27 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sfr1Q8BP27 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
Sfr1Q8BP27 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sfr1Q8BP27 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.6■■□□□ 1.37
Sfr1Q8BP27 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sfr1Q8BP27 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sfr1Q8BP27 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sfr1Q8BP27 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sfr1Q8BP27 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sfr1Q8BP27 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sfr1Q8BP27 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sfr1Q8BP27 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sfr1Q8BP27 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sfr1Q8BP27 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sfr1Q8BP27 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sfr1Q8BP27 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sfr1Q8BP27 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Sfr1Q8BP27 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sfr1Q8BP27 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Sfr1Q8BP27 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.53■■□□□ 1.36
Sfr1Q8BP27 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sfr1Q8BP27 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sfr1Q8BP27 Gm37136-201ENSMUST00000194368 194 ntBASIC23.52■■□□□ 1.36
Sfr1Q8BP27 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Sfr1Q8BP27 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sfr1Q8BP27 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms