Protein–RNA interactions for Protein: Q80VK6

Arhgef38, Rho guanine nucleotide exchange factor 38, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef38Q80VK6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Arhgef38Q80VK6 Nkain2-201ENSMUST00000092602 558 ntBASIC23.54■■□□□ 1.36
Arhgef38Q80VK6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Arhgef38Q80VK6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.53■■□□□ 1.36
Arhgef38Q80VK6 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.53■■□□□ 1.36
Arhgef38Q80VK6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Arhgef38Q80VK6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Arhgef38Q80VK6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.52■■□□□ 1.36
Arhgef38Q80VK6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Arhgef38Q80VK6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Arhgef38Q80VK6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.51■■□□□ 1.35
Arhgef38Q80VK6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Arhgef38Q80VK6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Arhgef38Q80VK6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Arhgef38Q80VK6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.49■■□□□ 1.35
Arhgef38Q80VK6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Arhgef38Q80VK6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.48■■□□□ 1.35
Arhgef38Q80VK6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Arhgef38Q80VK6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Arhgef38Q80VK6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Arhgef38Q80VK6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Arhgef38Q80VK6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Arhgef38Q80VK6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Arhgef38Q80VK6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Arhgef38Q80VK6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Arhgef38Q80VK6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.44■■□□□ 1.34
Arhgef38Q80VK6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Arhgef38Q80VK6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Arhgef38Q80VK6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Arhgef38Q80VK6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
Arhgef38Q80VK6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.42■■□□□ 1.34
Arhgef38Q80VK6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.41■■□□□ 1.34
Arhgef38Q80VK6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Arhgef38Q80VK6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Arhgef38Q80VK6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Arhgef38Q80VK6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Arhgef38Q80VK6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.39■■□□□ 1.34
Arhgef38Q80VK6 Gm6821-201ENSMUST00000107540 542 ntBASIC23.39■■□□□ 1.33
Arhgef38Q80VK6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Arhgef38Q80VK6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.39■■□□□ 1.33
Arhgef38Q80VK6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef38Q80VK6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef38Q80VK6 Gm8503-201ENSMUST00000118131 455 ntBASIC23.37■■□□□ 1.33
Arhgef38Q80VK6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef38Q80VK6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.37■■□□□ 1.33
Arhgef38Q80VK6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Arhgef38Q80VK6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Arhgef38Q80VK6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef38Q80VK6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef38Q80VK6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef38Q80VK6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef38Q80VK6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Arhgef38Q80VK6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.33■■□□□ 1.33
Arhgef38Q80VK6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.33■■□□□ 1.33
Arhgef38Q80VK6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Arhgef38Q80VK6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
Arhgef38Q80VK6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Arhgef38Q80VK6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Arhgef38Q80VK6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.32■■□□□ 1.32
Arhgef38Q80VK6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Arhgef38Q80VK6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef38Q80VK6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef38Q80VK6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Arhgef38Q80VK6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Arhgef38Q80VK6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.3■■□□□ 1.32
Arhgef38Q80VK6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Arhgef38Q80VK6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Arhgef38Q80VK6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Arhgef38Q80VK6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.29■■□□□ 1.32
Arhgef38Q80VK6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
Arhgef38Q80VK6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Arhgef38Q80VK6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.27■■□□□ 1.32
Arhgef38Q80VK6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Arhgef38Q80VK6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.26■■□□□ 1.31
Arhgef38Q80VK6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Arhgef38Q80VK6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.26■■□□□ 1.31
Arhgef38Q80VK6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Arhgef38Q80VK6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Arhgef38Q80VK6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Arhgef38Q80VK6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Arhgef38Q80VK6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Arhgef38Q80VK6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Arhgef38Q80VK6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.23■■□□□ 1.31
Arhgef38Q80VK6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Arhgef38Q80VK6 Particl-201ENSMUST00000205370 1560 ntBASIC23.22■■□□□ 1.31
Arhgef38Q80VK6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Arhgef38Q80VK6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms