Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Col5a2Q3U962 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.06■■■□□ 2.24
Col5a2Q3U962 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col5a2Q3U962 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Col5a2Q3U962 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col5a2Q3U962 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col5a2Q3U962 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col5a2Q3U962 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col5a2Q3U962 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col5a2Q3U962 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col5a2Q3U962 Gm15039-201ENSMUST00000118914 875 ntBASIC29.03■■■□□ 2.24
Col5a2Q3U962 Mir3960-201ENSMUST00000198213 73 ntBASIC29.02■■■□□ 2.24
Col5a2Q3U962 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Col5a2Q3U962 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Col5a2Q3U962 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29■■■□□ 2.23
Col5a2Q3U962 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Col5a2Q3U962 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col5a2Q3U962 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col5a2Q3U962 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col5a2Q3U962 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Col5a2Q3U962 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col5a2Q3U962 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col5a2Q3U962 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Col5a2Q3U962 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Col5a2Q3U962 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col5a2Q3U962 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Col5a2Q3U962 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Col5a2Q3U962 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Col5a2Q3U962 Gm14523-201ENSMUST00000117260 558 ntBASIC28.95■■■□□ 2.22
Col5a2Q3U962 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Col5a2Q3U962 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Col5a2Q3U962 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col5a2Q3U962 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col5a2Q3U962 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col5a2Q3U962 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Col5a2Q3U962 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col5a2Q3U962 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col5a2Q3U962 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Col5a2Q3U962 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.91■■■□□ 2.22
Col5a2Q3U962 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col5a2Q3U962 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Col5a2Q3U962 Gm5812-201ENSMUST00000061073 957 ntBASIC28.91■■■□□ 2.22
Col5a2Q3U962 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col5a2Q3U962 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col5a2Q3U962 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
Col5a2Q3U962 Gm22567-201ENSMUST00000175542 342 ntBASIC28.88■■■□□ 2.21
Col5a2Q3U962 Gm37136-201ENSMUST00000194368 194 ntBASIC28.88■■■□□ 2.21
Col5a2Q3U962 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Col5a2Q3U962 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.86■■■□□ 2.21
Col5a2Q3U962 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.86■■■□□ 2.21
Col5a2Q3U962 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Col5a2Q3U962 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Col5a2Q3U962 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Col5a2Q3U962 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.83■■■□□ 2.21
Col5a2Q3U962 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Col5a2Q3U962 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col5a2Q3U962 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col5a2Q3U962 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.82■■■□□ 2.2
Col5a2Q3U962 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.81■■■□□ 2.2
Col5a2Q3U962 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.8■■■□□ 2.2
Col5a2Q3U962 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.8■■■□□ 2.2
Col5a2Q3U962 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Col5a2Q3U962 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Col5a2Q3U962 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC28.79■■■□□ 2.2
Col5a2Q3U962 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Col5a2Q3U962 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Col5a2Q3U962 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col5a2Q3U962 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.78■■■□□ 2.2
Col5a2Q3U962 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col5a2Q3U962 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col5a2Q3U962 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col5a2Q3U962 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Col5a2Q3U962 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Col5a2Q3U962 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Col5a2Q3U962 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Col5a2Q3U962 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Col5a2Q3U962 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Col5a2Q3U962 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col5a2Q3U962 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col5a2Q3U962 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Col5a2Q3U962 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.73■■■□□ 2.19
Col5a2Q3U962 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col5a2Q3U962 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.72■■■□□ 2.19
Col5a2Q3U962 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Col5a2Q3U962 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Col5a2Q3U962 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Col5a2Q3U962 Gm5921-201ENSMUST00000075898 882 ntBASIC28.71■■■□□ 2.19
Col5a2Q3U962 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.7■■■□□ 2.18
Col5a2Q3U962 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col5a2Q3U962 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col5a2Q3U962 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.69■■■□□ 2.18
Col5a2Q3U962 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col5a2Q3U962 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col5a2Q3U962 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col5a2Q3U962 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Col5a2Q3U962 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC28.67■■■□□ 2.18
Col5a2Q3U962 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Col5a2Q3U962 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Col5a2Q3U962 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.66■■■□□ 2.18
Col5a2Q3U962 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28.66■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms