Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.46■■□□□ 1.19
Xrra1Q3U3V8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Xrra1Q3U3V8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Xrra1Q3U3V8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Xrra1Q3U3V8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Xrra1Q3U3V8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.45■■□□□ 1.18
Xrra1Q3U3V8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.44■■□□□ 1.18
Xrra1Q3U3V8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.43■■□□□ 1.18
Xrra1Q3U3V8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Xrra1Q3U3V8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Xrra1Q3U3V8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.41■■□□□ 1.18
Xrra1Q3U3V8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
Xrra1Q3U3V8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Xrra1Q3U3V8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Xrra1Q3U3V8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Xrra1Q3U3V8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.38■■□□□ 1.17
Xrra1Q3U3V8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Xrra1Q3U3V8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Xrra1Q3U3V8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Xrra1Q3U3V8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Xrra1Q3U3V8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Xrra1Q3U3V8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.36■■□□□ 1.17
Xrra1Q3U3V8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.36■■□□□ 1.17
Xrra1Q3U3V8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
Xrra1Q3U3V8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Xrra1Q3U3V8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Xrra1Q3U3V8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Xrra1Q3U3V8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Xrra1Q3U3V8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Xrra1Q3U3V8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Xrra1Q3U3V8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Xrra1Q3U3V8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Xrra1Q3U3V8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Xrra1Q3U3V8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Xrra1Q3U3V8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Xrra1Q3U3V8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.33■■□□□ 1.17
Xrra1Q3U3V8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Xrra1Q3U3V8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Xrra1Q3U3V8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Xrra1Q3U3V8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Xrra1Q3U3V8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Xrra1Q3U3V8 Gm30023-201ENSMUST00000197970 889 ntBASIC22.32■■□□□ 1.16
Xrra1Q3U3V8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Xrra1Q3U3V8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Xrra1Q3U3V8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Xrra1Q3U3V8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Xrra1Q3U3V8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Xrra1Q3U3V8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.3■■□□□ 1.16
Xrra1Q3U3V8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.3■■□□□ 1.16
Xrra1Q3U3V8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Xrra1Q3U3V8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.3■■□□□ 1.16
Xrra1Q3U3V8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Xrra1Q3U3V8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Xrra1Q3U3V8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Xrra1Q3U3V8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Xrra1Q3U3V8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.28■■□□□ 1.16
Xrra1Q3U3V8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Xrra1Q3U3V8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.28■■□□□ 1.16
Xrra1Q3U3V8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
Xrra1Q3U3V8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Xrra1Q3U3V8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Xrra1Q3U3V8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Xrra1Q3U3V8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Xrra1Q3U3V8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Xrra1Q3U3V8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Xrra1Q3U3V8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.25■■□□□ 1.15
Xrra1Q3U3V8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Xrra1Q3U3V8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Xrra1Q3U3V8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Xrra1Q3U3V8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Xrra1Q3U3V8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Xrra1Q3U3V8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Xrra1Q3U3V8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Xrra1Q3U3V8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Xrra1Q3U3V8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Xrra1Q3U3V8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.21■■□□□ 1.15
Xrra1Q3U3V8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Xrra1Q3U3V8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Xrra1Q3U3V8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.21■■□□□ 1.15
Xrra1Q3U3V8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Xrra1Q3U3V8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Xrra1Q3U3V8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Xrra1Q3U3V8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Xrra1Q3U3V8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Xrra1Q3U3V8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Xrra1Q3U3V8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Xrra1Q3U3V8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Xrra1Q3U3V8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Xrra1Q3U3V8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.18■■□□□ 1.14
Xrra1Q3U3V8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Xrra1Q3U3V8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Xrra1Q3U3V8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.17■■□□□ 1.14
Xrra1Q3U3V8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Xrra1Q3U3V8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
Xrra1Q3U3V8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Xrra1Q3U3V8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Xrra1Q3U3V8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Xrra1Q3U3V8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Xrra1Q3U3V8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Xrra1Q3U3V8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms