Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.432e-12■■■■■ 30.5
EWSR1Q01844 HBP1-207ENST00000468401 573 ntTSL 411.5□□□□□ -0.572e-12■■■■■ 30.5
EWSR1Q01844 HBP1-206ENST00000468116 579 ntTSL 49.75□□□□□ -0.852e-12■■■■■ 30.5
EWSR1Q01844 HBP1-213ENST00000497535 702 ntTSL 29.75□□□□□ -0.852e-12■■■■■ 30.5
EWSR1Q01844 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.563e-7■■■■■ 30.4
EWSR1Q01844 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.98□□□□□ -0.337e-9■■■■■ 30.4
EWSR1Q01844 DOT1L-205ENST00000478937 638 ntTSL 39.81□□□□□ -0.848e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.659e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.039e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.079e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-210ENST00000492567 684 ntTSL 214.3□□□□□ -0.129e-7■■■■■ 30.4
EWSR1Q01844 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.37□□□□□ -0.439e-7■■■■■ 30.4
EWSR1Q01844 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.11e-6■■■■■ 30.4
EWSR1Q01844 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.141e-6■■■■■ 30.4
EWSR1Q01844 PIP5K1C-204ENST00000587482 1311 ntTSL 511.97□□□□□ -0.496e-7■■■■■ 30.4
EWSR1Q01844 DVL1-203ENST00000472445 639 ntTSL 213.29□□□□□ -0.283e-8■■■■■ 30.4
EWSR1Q01844 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.056e-7■■■■■ 30.3
EWSR1Q01844 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.376e-7■■■■■ 30.3
EWSR1Q01844 BSG-212ENST00000590218 545 ntTSL 214.47□□□□□ -0.094e-8■■■■■ 30.3
EWSR1Q01844 PTDSS2-203ENST00000525727 837 ntTSL 1 (best)15.61■□□□□ 0.091e-6■■■■■ 30.3
EWSR1Q01844 PTDSS2-207ENST00000527479 520 ntTSL 515.26■□□□□ 0.031e-6■■■■■ 30.3
EWSR1Q01844 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.65■□□□□ 0.11e-7■■■■■ 30.2
EWSR1Q01844 TCF25-208ENST00000563032 274 ntTSL 214.95□□□□□ -0.021e-7■■■■■ 30.2
EWSR1Q01844 TCF25-212ENST00000564652 860 ntTSL 314.69□□□□□ -0.061e-7■■■■■ 30.2
EWSR1Q01844 TCF25-203ENST00000561585 981 ntTSL 212.68□□□□□ -0.381e-7■■■■■ 30.2
EWSR1Q01844 TCF25-214ENST00000565196 655 ntTSL 511.96□□□□□ -0.491e-7■■■■■ 30.2
EWSR1Q01844 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.846e-7■■■■■ 30.2
EWSR1Q01844 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.326e-7■■■■■ 30.2
EWSR1Q01844 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC6.4□□□□□ -1.388e-8■■■■■ 30.1
EWSR1Q01844 RXRA-203ENST00000484822 5215 ntTSL 213.35□□□□□ -0.276e-7■■■■■ 30.1
EWSR1Q01844 MMP17-210ENST00000545671 775 ntTSL 318.3■□□□□ 0.522e-7■■■■■ 30
EWSR1Q01844 MMP17-211ENST00000545790 552 ntTSL 217.47■□□□□ 0.392e-7■■■■■ 30
EWSR1Q01844 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.362e-7■■■■■ 30
EWSR1Q01844 CD81-205ENST00000475945 606 ntTSL 212.97□□□□□ -0.335e-7■■■■■ 29.9
EWSR1Q01844 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.595e-7■■■■■ 29.9
EWSR1Q01844 CD81-215ENST00000530648 558 ntTSL 410.91□□□□□ -0.665e-7■■■■■ 29.9
EWSR1Q01844 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.831e-7■■■■■ 29.9
EWSR1Q01844 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.09■□□□□ 0.331e-7■■■■■ 29.9
EWSR1Q01844 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.111e-7■■■■■ 29.9
EWSR1Q01844 DHRSX-204ENST00000441131 539 ntTSL 25.66□□□□□ -1.57e-9■■■■■ 29.8
EWSR1Q01844 BSG-210ENST00000576925 611 ntTSL 212.71□□□□□ -0.371e-7■■■■■ 29.8
EWSR1Q01844 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.759e-8■■■■■ 29.8
EWSR1Q01844 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC9.42□□□□□ -0.95e-7■■■■■ 29.7
EWSR1Q01844 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.15e-7■■■■■ 29.7
EWSR1Q01844 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.845e-7■■■■■ 29.7
EWSR1Q01844 RANBP1-213ENST00000486575 2177 ntTSL 218.17■□□□□ 0.57e-17■■■■■ 29.7
EWSR1Q01844 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)12.41□□□□□ -0.422e-8■■■■■ 29.7
EWSR1Q01844 LINC00894-205ENST00000449111 3414 ntTSL 57.96□□□□□ -1.145e-7■■■■■ 29.7
EWSR1Q01844 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.1■□□□□ 0.332e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-209ENST00000518437 240 ntTSL 212.89□□□□□ -0.353e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.06□□□□□ -0.643e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-203ENST00000469846 670 ntTSL 38.6□□□□□ -1.033e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC6.22□□□□□ -1.413e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.63□□□□□ -1.673e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-218ENST00000522525 1867 ntTSL 1 (best)4.29□□□□□ -1.723e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.05□□□□□ -1.763e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-201ENST00000467069 667 ntTSL 53.26□□□□□ -1.893e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-216ENST00000521708 549 ntTSL 33.01□□□□□ -1.933e-8■■■■■ 29.6
EWSR1Q01844 THUMPD3-AS1-207ENST00000494680 544 ntTSL 52.73□□□□□ -1.973e-8■■■■■ 29.6
EWSR1Q01844 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.362e-7■■■■■ 29.5
EWSR1Q01844 TTC7B-202ENST00000553948 630 ntTSL 523.79■■□□□ 1.46e-8■■■■■ 29.5
EWSR1Q01844 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.026e-8■■■■■ 29.5
EWSR1Q01844 MLF1-215ENST00000498592 707 ntTSL 313.98□□□□□ -0.176e-8■■■■■ 29.5
EWSR1Q01844 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.7□□□□□ -0.386e-8■■■■■ 29.5
EWSR1Q01844 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.59□□□□□ -0.396e-8■■■■■ 29.5
EWSR1Q01844 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.29□□□□□ -0.446e-8■■■■■ 29.5
EWSR1Q01844 MLF1-212ENST00000491767 787 ntTSL 1 (best)12.13□□□□□ -0.476e-8■■■■■ 29.5
EWSR1Q01844 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.486e-8■■■■■ 29.5
EWSR1Q01844 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.98□□□□□ -0.496e-8■■■■■ 29.5
EWSR1Q01844 PDXK-217ENST00000490666 577 ntTSL 510.85□□□□□ -0.676e-8■■■■■ 29.5
EWSR1Q01844 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.726e-8■■■■■ 29.5
EWSR1Q01844 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC10.21□□□□□ -0.776e-8■■■■■ 29.5
EWSR1Q01844 ST6GAL1-216ENST00000458216 507 ntTSL 39.85□□□□□ -0.838e-8■■■■■ 29.5
EWSR1Q01844 SH3BP2-216ENST00000510193 407 ntTSL 39.4□□□□□ -0.96e-8■■■■■ 29.5
EWSR1Q01844 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.966e-8■■■■■ 29.5
EWSR1Q01844 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC8.67□□□□□ -1.026e-8■■■■■ 29.5
EWSR1Q01844 ST6GAL1-219ENST00000468614 642 ntTSL 28.35□□□□□ -1.078e-8■■■■■ 29.5
EWSR1Q01844 INPP5A-201ENST00000342652 832 ntTSL 57.48□□□□□ -1.216e-8■■■■■ 29.5
EWSR1Q01844 MLF1-214ENST00000497004 3048 ntTSL 1 (best)7.18□□□□□ -1.266e-8■■■■■ 29.5
EWSR1Q01844 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.296e-8■■■■■ 29.5
EWSR1Q01844 MLF1-213ENST00000495452 742 ntTSL 35.99□□□□□ -1.456e-8■■■■■ 29.5
EWSR1Q01844 MLF1-207ENST00000477042 750 ntTSL 55.6□□□□□ -1.516e-8■■■■■ 29.5
EWSR1Q01844 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.5□□□□□ -1.696e-8■■■■■ 29.5
EWSR1Q01844 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.14□□□□□ -1.756e-8■■■■■ 29.5
EWSR1Q01844 MLF1-204ENST00000466246 653 ntTSL 21.58□□□□□ -2.166e-8■■■■■ 29.5
EWSR1Q01844 MLF1-211ENST00000487838 473 ntTSL 21.42□□□□□ -2.186e-8■■■■■ 29.5
EWSR1Q01844 PPP6R2-206ENST00000427222 1811 ntTSL 514.57□□□□□ -0.083e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.443e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.453e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.473e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-205ENST00000401672 2199 ntTSL 211.41□□□□□ -0.583e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.643e-7■■■■■ 29.5
EWSR1Q01844 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.83e-7■■■■■ 29.5
EWSR1Q01844 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.43□□□□□ -0.589e-8■■■■■ 29.4
EWSR1Q01844 AC011450.1-201ENST00000602554 511 ntTSL 26.43□□□□□ -1.389e-8■■■■■ 29.4
EWSR1Q01844 SSBP4-208ENST00000600628 550 ntTSL 36.41□□□□□ -1.384e-7■■■■■ 29.4
EWSR1Q01844 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.432e-10■■■■■ 29.4
EWSR1Q01844 FAM98B-204ENST00000559431 305 ntTSL 59.18□□□□□ -0.942e-10■■■■■ 29.4
EWSR1Q01844 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.38□□□□□ -0.591e-7■■■■■ 29.4
EWSR1Q01844 TMEM91-201ENST00000342187 454 ntTSL 57.73□□□□□ -1.171e-7■■■■■ 29.4
Retrieved 100 of 7,101 protein–RNA pairs in 95.5 ms