Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sssca1P56873 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sssca1P56873 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sssca1P56873 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sssca1P56873 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sssca1P56873 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sssca1P56873 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Sssca1P56873 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sssca1P56873 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sssca1P56873 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sssca1P56873 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sssca1P56873 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sssca1P56873 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sssca1P56873 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sssca1P56873 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sssca1P56873 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sssca1P56873 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sssca1P56873 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sssca1P56873 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sssca1P56873 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sssca1P56873 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sssca1P56873 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sssca1P56873 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sssca1P56873 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.84■□□□□ 0.61
Sssca1P56873 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sssca1P56873 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sssca1P56873 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.84■□□□□ 0.61
Sssca1P56873 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sssca1P56873 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.83■□□□□ 0.6
Sssca1P56873 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sssca1P56873 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sssca1P56873 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sssca1P56873 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sssca1P56873 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sssca1P56873 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.81■□□□□ 0.6
Sssca1P56873 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sssca1P56873 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sssca1P56873 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sssca1P56873 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sssca1P56873 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sssca1P56873 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.8■□□□□ 0.6
Sssca1P56873 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.8■□□□□ 0.6
Sssca1P56873 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sssca1P56873 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sssca1P56873 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sssca1P56873 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sssca1P56873 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sssca1P56873 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sssca1P56873 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sssca1P56873 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sssca1P56873 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sssca1P56873 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sssca1P56873 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sssca1P56873 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sssca1P56873 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sssca1P56873 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.77■□□□□ 0.6
Sssca1P56873 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Sssca1P56873 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.77■□□□□ 0.6
Sssca1P56873 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sssca1P56873 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.76■□□□□ 0.59
Sssca1P56873 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sssca1P56873 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sssca1P56873 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.76■□□□□ 0.59
Sssca1P56873 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sssca1P56873 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sssca1P56873 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sssca1P56873 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sssca1P56873 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sssca1P56873 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sssca1P56873 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sssca1P56873 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sssca1P56873 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sssca1P56873 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.72■□□□□ 0.59
Sssca1P56873 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sssca1P56873 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sssca1P56873 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sssca1P56873 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sssca1P56873 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sssca1P56873 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sssca1P56873 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sssca1P56873 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sssca1P56873 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sssca1P56873 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sssca1P56873 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sssca1P56873 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sssca1P56873 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sssca1P56873 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sssca1P56873 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sssca1P56873 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.69■□□□□ 0.58
Sssca1P56873 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sssca1P56873 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Sssca1P56873 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sssca1P56873 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.68■□□□□ 0.58
Sssca1P56873 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms