Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek1P51954 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nek1P51954 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.31■■□□□ 1.8
Nek1P51954 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nek1P51954 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nek1P51954 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Nek1P51954 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Nek1P51954 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nek1P51954 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.27■■□□□ 1.8
Nek1P51954 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek1P51954 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek1P51954 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nek1P51954 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nek1P51954 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Nek1P51954 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.25■■□□□ 1.79
Nek1P51954 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek1P51954 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nek1P51954 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek1P51954 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.21■■□□□ 1.79
Nek1P51954 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Nek1P51954 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nek1P51954 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nek1P51954 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nek1P51954 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nek1P51954 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Nek1P51954 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Nek1P51954 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nek1P51954 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.18■■□□□ 1.78
Nek1P51954 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nek1P51954 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.18■■□□□ 1.78
Nek1P51954 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Nek1P51954 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.17■■□□□ 1.78
Nek1P51954 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nek1P51954 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.17■■□□□ 1.78
Nek1P51954 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nek1P51954 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nek1P51954 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nek1P51954 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nek1P51954 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Nek1P51954 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Nek1P51954 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Nek1P51954 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nek1P51954 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nek1P51954 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Nek1P51954 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Nek1P51954 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Nek1P51954 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nek1P51954 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nek1P51954 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nek1P51954 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nek1P51954 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nek1P51954 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nek1P51954 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nek1P51954 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nek1P51954 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Nek1P51954 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nek1P51954 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nek1P51954 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nek1P51954 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.05■■□□□ 1.76
Nek1P51954 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Nek1P51954 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nek1P51954 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Nek1P51954 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nek1P51954 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.04■■□□□ 1.76
Nek1P51954 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Nek1P51954 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Nek1P51954 Gm30023-201ENSMUST00000197970 889 ntBASIC26.03■■□□□ 1.76
Nek1P51954 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.03■■□□□ 1.76
Nek1P51954 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nek1P51954 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Nek1P51954 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nek1P51954 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nek1P51954 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nek1P51954 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.01■■□□□ 1.75
Nek1P51954 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Nek1P51954 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Nek1P51954 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26■■□□□ 1.75
Nek1P51954 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nek1P51954 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nek1P51954 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Nek1P51954 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nek1P51954 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.99■■□□□ 1.75
Nek1P51954 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.99■■□□□ 1.75
Nek1P51954 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nek1P51954 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nek1P51954 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nek1P51954 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nek1P51954 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nek1P51954 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Nek1P51954 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Nek1P51954 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Nek1P51954 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms