Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 YRF1-7YPL283C 5580 nt8.19□□□□□ -1.1
MRPL40P36534 CHS7YHR142W 951 nt8.19□□□□□ -1.1
MRPL40P36534 RRT14YIL127C 621 nt8.18□□□□□ -1.1
MRPL40P36534 YNL190WYNL190W 615 nt8.18□□□□□ -1.1
MRPL40P36534 GPM1YKL152C 744 nt8.17□□□□□ -1.1
MRPL40P36534 YMR210WYMR210W 1350 nt8.17□□□□□ -1.1
MRPL40P36534 THI3YDL080C 1830 nt8.17□□□□□ -1.1
MRPL40P36534 YDR467CYDR467C 327 nt8.16□□□□□ -1.1
MRPL40P36534 ADE5,7YGL234W 2409 nt8.15□□□□□ -1.1
MRPL40P36534 OCH1YGL038C 1443 nt8.15□□□□□ -1.1
MRPL40P36534 CAK1YFL029C 1107 nt8.15□□□□□ -1.1
MRPL40P36534 YIR035CYIR035C 765 nt8.15□□□□□ -1.1
MRPL40P36534 MRP1YDR347W 966 nt8.14□□□□□ -1.11
MRPL40P36534 MET22YOL064C 1074 nt8.14□□□□□ -1.11
MRPL40P36534 OLA1YBR025C 1185 nt8.14□□□□□ -1.11
MRPL40P36534 YOR268CYOR268C 399 nt8.14□□□□□ -1.11
MRPL40P36534 MFT1YML062C 1179 nt8.13□□□□□ -1.11
MRPL40P36534 PET18YCR020C 648 nt8.12□□□□□ -1.11
MRPL40P36534 INH1YDL181W 258 nt8.12□□□□□ -1.11
MRPL40P36534 LEU4YNL104C 1860 nt8.12□□□□□ -1.11
MRPL40P36534 YER156CYER156C 1017 nt8.11□□□□□ -1.11
MRPL40P36534 AAC3YBR085W 924 nt8.11□□□□□ -1.11
MRPL40P36534 TMS1YDR105C 1422 nt8.11□□□□□ -1.11
MRPL40P36534 tE(CUC)DtE(CUC)D 72 nt8.1□□□□□ -1.11
MRPL40P36534 tE(CUC)ItE(CUC)I 72 nt8.1□□□□□ -1.11
MRPL40P36534 YBL095WYBL095W 813 nt8.1□□□□□ -1.11
MRPL40P36534 Q0010Q0010 387 nt8.1□□□□□ -1.11
MRPL40P36534 NDE1YMR145C 1683 nt8.1□□□□□ -1.11
MRPL40P36534 PDC6YGR087C 1692 nt8.09□□□□□ -1.11
MRPL40P36534 YPR084WYPR084W 1371 nt8.09□□□□□ -1.12
MRPL40P36534 GDH1YOR375C 1365 nt8.08□□□□□ -1.12
MRPL40P36534 ADA2YDR448W 1305 nt8.07□□□□□ -1.12
MRPL40P36534 YIL177CYIL177C 5277 nt8.07□□□□□ -1.12
MRPL40P36534 YMC2YBR104W 990 nt8.07□□□□□ -1.12
MRPL40P36534 BUB2YMR055C 921 nt8.06□□□□□ -1.12
MRPL40P36534 LAS17YOR181W 1902 nt8.05□□□□□ -1.12
MRPL40P36534 MRS4YKR052C 915 nt8.05□□□□□ -1.12
MRPL40P36534 RNA170RNA170 169 nt8.05□□□□□ -1.12
MRPL40P36534 FRT1YOR324C 1809 nt8.05□□□□□ -1.12
MRPL40P36534 BEM1YBR200W 1656 nt8.05□□□□□ -1.12
MRPL40P36534 UTR5YEL035C 501 nt8.04□□□□□ -1.12
MRPL40P36534 YPT31YER031C 672 nt8.04□□□□□ -1.12
MRPL40P36534 YJR149WYJR149W 1215 nt8.04□□□□□ -1.12
MRPL40P36534 YMR206WYMR206W 942 nt8.04□□□□□ -1.12
MRPL40P36534 NBA1YOL070C 1506 nt8.03□□□□□ -1.12
MRPL40P36534 MFG1YDL233W 1377 nt8.03□□□□□ -1.12
MRPL40P36534 TAD2YJL035C 753 nt8.03□□□□□ -1.12
MRPL40P36534 RPS6AYPL090C 711 nt8.03□□□□□ -1.12
MRPL40P36534 RPS6BYBR181C 711 nt8.03□□□□□ -1.12
MRPL40P36534 HXT10YFL011W 1641 nt8.03□□□□□ -1.12
MRPL40P36534 EDC2YER035W 438 nt8.02□□□□□ -1.13
MRPL40P36534 YJL009WYJL009W 327 nt8.02□□□□□ -1.13
MRPL40P36534 BXI1YNL305C 894 nt8.02□□□□□ -1.13
MRPL40P36534 ELP4YPL101W 1371 nt8.01□□□□□ -1.13
MRPL40P36534 MIM1YOL026C 342 nt8.01□□□□□ -1.13
MRPL40P36534 RHO1YPR165W 630 nt8.01□□□□□ -1.13
MRPL40P36534 AGP3YFL055W 1677 nt8□□□□□ -1.13
MRPL40P36534 tL(UAA)B1tL(UAA)B1 84 nt8□□□□□ -1.13
MRPL40P36534 tL(UAA)B2tL(UAA)B2 84 nt8□□□□□ -1.13
MRPL40P36534 tL(UAA)DtL(UAA)D 84 nt8□□□□□ -1.13
MRPL40P36534 SUP51tL(UAA)J 84 nt8□□□□□ -1.13
MRPL40P36534 tL(UAA)KtL(UAA)K 84 nt8□□□□□ -1.13
MRPL40P36534 tL(UAA)LtL(UAA)L 84 nt8□□□□□ -1.13
MRPL40P36534 tL(UAA)NtL(UAA)N 84 nt8□□□□□ -1.13
MRPL40P36534 KAE1YKR038C 1161 nt8□□□□□ -1.13
MRPL40P36534 GGC1YDL198C 903 nt7.99□□□□□ -1.13
MRPL40P36534 NPP2YEL016C 1482 nt7.98□□□□□ -1.13
MRPL40P36534 YEL023CYEL023C 2049 nt7.98□□□□□ -1.13
MRPL40P36534 ATP2YJR121W 1536 nt7.98□□□□□ -1.13
MRPL40P36534 YBR056WYBR056W 1506 nt7.98□□□□□ -1.13
MRPL40P36534 TDH1YJL052W 999 nt7.97□□□□□ -1.13
MRPL40P36534 HOG1YLR113W 1308 nt7.97□□□□□ -1.13
MRPL40P36534 PUP3YER094C 618 nt7.96□□□□□ -1.14
MRPL40P36534 CTF3YLR381W 2202 nt7.95□□□□□ -1.14
MRPL40P36534 THI73YLR004C 1572 nt7.95□□□□□ -1.14
MRPL40P36534 PMA2YPL036W 2844 nt7.94□□□□□ -1.14
MRPL40P36534 STF1YDL130W-A 261 nt7.94□□□□□ -1.14
MRPL40P36534 PMU1YKL128C 888 nt7.94□□□□□ -1.14
MRPL40P36534 SDH8YBR269C 417 nt7.94□□□□□ -1.14
MRPL40P36534 AAT1YKL106W 1356 nt7.94□□□□□ -1.14
MRPL40P36534 TOS1YBR162C 1368 nt7.94□□□□□ -1.14
MRPL40P36534 ADE1YAR015W 921 nt7.93□□□□□ -1.14
MRPL40P36534 CCR4YAL021C 2514 nt7.93□□□□□ -1.14
MRPL40P36534 snR86snR86 1004 nt7.91□□□□□ -1.14
MRPL40P36534 PRE5YMR314W 705 nt7.91□□□□□ -1.14
MRPL40P36534 NUP53YMR153W 1428 nt7.91□□□□□ -1.14
MRPL40P36534 PRE10YOR362C 867 nt7.9□□□□□ -1.14
MRPL40P36534 tD(GUC)BtD(GUC)B 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)DtD(GUC)D 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)G1tD(GUC)G1 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)G2tD(GUC)G2 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)I1tD(GUC)I1 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)I2tD(GUC)I2 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)J1tD(GUC)J1 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)J2tD(GUC)J2 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)J3tD(GUC)J3 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)J4tD(GUC)J4 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)KtD(GUC)K 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)L1tD(GUC)L1 72 nt7.89□□□□□ -1.15
MRPL40P36534 tD(GUC)L2tD(GUC)L2 72 nt7.89□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms