Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf1bP25119 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf1bP25119 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf1bP25119 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf1bP25119 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf1bP25119 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf1bP25119 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfrsf1bP25119 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.85■■□□□ 1.09
Tnfrsf1bP25119 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf1bP25119 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf1bP25119 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf1bP25119 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.84■■□□□ 1.09
Tnfrsf1bP25119 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.84■■□□□ 1.09
Tnfrsf1bP25119 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf1bP25119 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.82■■□□□ 1.08
Tnfrsf1bP25119 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Tnfrsf1bP25119 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf1bP25119 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf1bP25119 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf1bP25119 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf1bP25119 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf1bP25119 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Tnfrsf1bP25119 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf1bP25119 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf1bP25119 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf1bP25119 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf1bP25119 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf1bP25119 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfrsf1bP25119 Particl-201ENSMUST00000205370 1560 ntBASIC21.77■■□□□ 1.08
Tnfrsf1bP25119 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfrsf1bP25119 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.76■■□□□ 1.07
Tnfrsf1bP25119 Gm7432-201ENSMUST00000210343 879 ntBASIC21.76■■□□□ 1.07
Tnfrsf1bP25119 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf1bP25119 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf1bP25119 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf1bP25119 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf1bP25119 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
Tnfrsf1bP25119 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Tnfrsf1bP25119 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tnfrsf1bP25119 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf1bP25119 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.72■■□□□ 1.07
Tnfrsf1bP25119 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Tnfrsf1bP25119 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.71■■□□□ 1.07
Tnfrsf1bP25119 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Tnfrsf1bP25119 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf1bP25119 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf1bP25119 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf1bP25119 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf1bP25119 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf1bP25119 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf1bP25119 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf1bP25119 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf1bP25119 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf1bP25119 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.67■■□□□ 1.06
Tnfrsf1bP25119 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf1bP25119 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf1bP25119 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf1bP25119 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tnfrsf1bP25119 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf1bP25119 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf1bP25119 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf1bP25119 Gm11599-201ENSMUST00000118720 878 ntBASIC21.65■■□□□ 1.06
Tnfrsf1bP25119 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.65■■□□□ 1.06
Tnfrsf1bP25119 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf1bP25119 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf1bP25119 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf1bP25119 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.64■■□□□ 1.05
Tnfrsf1bP25119 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.64■■□□□ 1.05
Tnfrsf1bP25119 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf1bP25119 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Tnfrsf1bP25119 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf1bP25119 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf1bP25119 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Tnfrsf1bP25119 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf1bP25119 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Tnfrsf1bP25119 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf1bP25119 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf1bP25119 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf1bP25119 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf1bP25119 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf1bP25119 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf1bP25119 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf1bP25119 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf1bP25119 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf1bP25119 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf1bP25119 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf1bP25119 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf1bP25119 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf1bP25119 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.56■■□□□ 1.04
Tnfrsf1bP25119 Gm37136-201ENSMUST00000194368 194 ntBASIC21.56■■□□□ 1.04
Tnfrsf1bP25119 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf1bP25119 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf1bP25119 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms