Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd48P18181 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.96■□□□□ 0.95
Cd48P18181 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cd48P18181 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cd48P18181 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd48P18181 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Cd48P18181 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd48P18181 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd48P18181 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd48P18181 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cd48P18181 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd48P18181 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.92■□□□□ 0.94
Cd48P18181 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd48P18181 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd48P18181 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd48P18181 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd48P18181 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd48P18181 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd48P18181 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.9■□□□□ 0.94
Cd48P18181 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd48P18181 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cd48P18181 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd48P18181 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd48P18181 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd48P18181 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd48P18181 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd48P18181 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd48P18181 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.87■□□□□ 0.93
Cd48P18181 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.86■□□□□ 0.93
Cd48P18181 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd48P18181 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cd48P18181 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Cd48P18181 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd48P18181 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd48P18181 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cd48P18181 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd48P18181 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd48P18181 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Cd48P18181 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd48P18181 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cd48P18181 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd48P18181 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd48P18181 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd48P18181 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cd48P18181 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cd48P18181 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.82■□□□□ 0.92
Cd48P18181 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.82■□□□□ 0.92
Cd48P18181 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Cd48P18181 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd48P18181 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.82■□□□□ 0.92
Cd48P18181 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd48P18181 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd48P18181 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd48P18181 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd48P18181 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cd48P18181 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd48P18181 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd48P18181 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd48P18181 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd48P18181 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd48P18181 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Cd48P18181 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd48P18181 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd48P18181 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd48P18181 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd48P18181 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd48P18181 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd48P18181 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cd48P18181 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cd48P18181 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd48P18181 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd48P18181 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd48P18181 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cd48P18181 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd48P18181 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd48P18181 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd48P18181 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cd48P18181 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd48P18181 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd48P18181 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd48P18181 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd48P18181 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd48P18181 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cd48P18181 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd48P18181 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd48P18181 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd48P18181 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cd48P18181 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd48P18181 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd48P18181 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cd48P18181 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd48P18181 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd48P18181 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 206.7 ms