Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YCR102CYCR102C 1107 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 SOR2YDL246C 1074 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 MCM21YDR318W 1107 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 YUH1YJR099W 711 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 SOR1YJR159W 1074 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 YKL091CYKL091C 933 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 RAS1YOR101W 930 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 YPR177CYPR177C 372 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 PCL9YDL179W 915 nt8.85□□□□□ -0.99
TY1A-PR2P0CX60 YGL218WYGL218W 651 nt8.85□□□□□ -0.99
TY1A-PR2P0CX60 HYM1YKL189W 1200 nt8.85□□□□□ -0.99
TY1A-PR2P0CX60 TEP1YNL128W 1305 nt8.84□□□□□ -0.99
TY1A-PR2P0CX60 GAL1YBR020W 1587 nt8.84□□□□□ -0.99
TY1A-PR2P0CX60 snR37snR37 386 nt8.84□□□□□ -0.99
TY1A-PR2P0CX60 CTF18YMR078C 2226 nt8.83□□□□□ -1
TY1A-PR2P0CX60 SEN2YLR105C 1134 nt8.83□□□□□ -1
TY1A-PR2P0CX60 PHA2YNL316C 1005 nt8.83□□□□□ -1
TY1A-PR2P0CX60 VPS68YOL129W 555 nt8.83□□□□□ -1
TY1A-PR2P0CX60 RRP36YOR287C 903 nt8.83□□□□□ -1
TY1A-PR2P0CX60 ANP1YEL036C 1503 nt8.83□□□□□ -1
TY1A-PR2P0CX60 YDR042CYDR042C 603 nt8.82□□□□□ -1
TY1A-PR2P0CX60 PIB1YDR313C 861 nt8.82□□□□□ -1
TY1A-PR2P0CX60 YHL045WYHL045W 348 nt8.82□□□□□ -1
TY1A-PR2P0CX60 YAL026C-AYAL026C-A 438 nt8.82□□□□□ -1
TY1A-PR2P0CX60 OST3YOR085W 1053 nt8.82□□□□□ -1
TY1A-PR2P0CX60 LEU2YCL018W 1095 nt8.82□□□□□ -1
TY1A-PR2P0CX60 STR3YGL184C 1398 nt8.82□□□□□ -1
TY1A-PR2P0CX60 RKM4YDR257C 1485 nt8.82□□□□□ -1
TY1A-PR2P0CX60 YGL114WYGL114W 2178 nt8.82□□□□□ -1
TY1A-PR2P0CX60 YDR306CYDR306C 1437 nt8.81□□□□□ -1
TY1A-PR2P0CX60 YDL086C-AYDL086C-A 435 nt8.81□□□□□ -1
TY1A-PR2P0CX60 YSC83YHR017W 1158 nt8.81□□□□□ -1
TY1A-PR2P0CX60 YOL050CYOL050C 321 nt8.81□□□□□ -1
TY1A-PR2P0CX60 YOR020W-AYOR020W-A 273 nt8.81□□□□□ -1
TY1A-PR2P0CX60 ATG23YLR431C 1362 nt8.81□□□□□ -1
TY1A-PR2P0CX60 PAF1YBR279W 1338 nt8.8□□□□□ -1
TY1A-PR2P0CX60 YCR016WYCR016W 873 nt8.8□□□□□ -1
TY1A-PR2P0CX60 SPO16YHR153C 597 nt8.8□□□□□ -1
TY1A-PR2P0CX60 YJL047C-AYJL047C-A 135 nt8.8□□□□□ -1
TY1A-PR2P0CX60 XPT1YJR133W 630 nt8.8□□□□□ -1
TY1A-PR2P0CX60 MUP1YGR055W 1725 nt8.8□□□□□ -1
TY1A-PR2P0CX60 RRI1YDL216C 1323 nt8.8□□□□□ -1
TY1A-PR2P0CX60 MPC54YOR177C 1395 nt8.79□□□□□ -1
TY1A-PR2P0CX60 LUC7YDL087C 786 nt8.79□□□□□ -1
TY1A-PR2P0CX60 YDR222WYDR222W 1248 nt8.79□□□□□ -1
TY1A-PR2P0CX60 ERG20YJL167W 1059 nt8.79□□□□□ -1
TY1A-PR2P0CX60 DID2YKR035W-A 615 nt8.79□□□□□ -1
TY1A-PR2P0CX60 RNH1YMR234W 1047 nt8.79□□□□□ -1
TY1A-PR2P0CX60 RUF20RUF20 443 nt8.79□□□□□ -1
TY1A-PR2P0CX60 CBP6YBR120C 489 nt8.79□□□□□ -1
TY1A-PR2P0CX60 DUT1YBR252W 444 nt8.79□□□□□ -1
TY1A-PR2P0CX60 MAE1YKL029C 2010 nt8.78□□□□□ -1
TY1A-PR2P0CX60 YFH7YFR007W 1062 nt8.78□□□□□ -1
TY1A-PR2P0CX60 MDM12YOL009C 816 nt8.78□□□□□ -1
TY1A-PR2P0CX60 DDR2YOL052C-A 186 nt8.78□□□□□ -1
TY1A-PR2P0CX60 COG2YGR120C 789 nt8.77□□□□□ -1.01
TY1A-PR2P0CX60 WHI5YOR083W 888 nt8.77□□□□□ -1.01
TY1A-PR2P0CX60 MXR2YCL033C 507 nt8.77□□□□□ -1.01
TY1A-PR2P0CX60 OMS1YDR316W 1416 nt8.77□□□□□ -1.01
TY1A-PR2P0CX60 SFP1YLR403W 2052 nt8.77□□□□□ -1.01
TY1A-PR2P0CX60 RRP14YKL082C 1305 nt8.77□□□□□ -1.01
TY1A-PR2P0CX60 BNA2YJR078W 1362 nt8.76□□□□□ -1.01
TY1A-PR2P0CX60 TRP1YDR007W 675 nt8.76□□□□□ -1.01
TY1A-PR2P0CX60 RRF1YHR038W 693 nt8.76□□□□□ -1.01
TY1A-PR2P0CX60 LPX1YOR084W 1164 nt8.76□□□□□ -1.01
TY1A-PR2P0CX60 DRN1YGR093W 1524 nt8.75□□□□□ -1.01
TY1A-PR2P0CX60 NSA1YGL111W 1392 nt8.75□□□□□ -1.01
TY1A-PR2P0CX60 MAK32YCR019W 1092 nt8.75□□□□□ -1.01
TY1A-PR2P0CX60 YDR524W-CYDR524W-C 90 nt8.75□□□□□ -1.01
TY1A-PR2P0CX60 YGL235WYGL235W 537 nt8.75□□□□□ -1.01
TY1A-PR2P0CX60 MRPL15YLR312W-A 762 nt8.75□□□□□ -1.01
TY1A-PR2P0CX60 HDA1YNL021W 2121 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 YCR006CYCR006C 474 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 INM1YHR046C 888 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 ERP5YHR110W 639 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 WSS1YHR134W 810 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 SPO12YHR152W 522 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 YML094C-AYML094C-A 402 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 YNL217WYNL217W 981 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 BUD21YOR078W 645 nt8.74□□□□□ -1.01
TY1A-PR2P0CX60 INA1YLR413W 2028 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 TVP23YDR084C 600 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 MTQ2YDR140W 666 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 HIM1YDR317W 1245 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 IRC9YJL142C 393 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 YKL097CYKL097C 411 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 YAL064WYAL064W 285 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 YBR027CYBR027C 333 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 HHO1YPL127C 777 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 GPI16YHR188C 1833 nt8.73□□□□□ -1.01
TY1A-PR2P0CX60 tR(ACG)Q2tR(ACG)Q2 74 nt8.72□□□□□ -1.01
TY1A-PR2P0CX60 MRPL49YJL096W 486 nt8.72□□□□□ -1.01
TY1A-PR2P0CX60 MRP7YNL005C 1116 nt8.72□□□□□ -1.01
TY1A-PR2P0CX60 YDR336WYDR336W 945 nt8.71□□□□□ -1.02
TY1A-PR2P0CX60 YML090WYML090W 387 nt8.71□□□□□ -1.02
TY1A-PR2P0CX60 MTQ1YNL063W 945 nt8.71□□□□□ -1.02
TY1A-PR2P0CX60 HRT1YOL133W 366 nt8.71□□□□□ -1.02
TY1A-PR2P0CX60 TFB6YOR352W 1032 nt8.71□□□□□ -1.02
TY1A-PR2P0CX60 CLD1YGR110W 1338 nt8.71□□□□□ -1.02
TY1A-PR2P0CX60 GDH3YAL062W 1374 nt8.71□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms