Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.11■□□□□ 0.81
H3f3cP02301 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3f3cP02301 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
H3f3cP02301 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3f3cP02301 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
H3f3cP02301 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3f3cP02301 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H3f3cP02301 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H3f3cP02301 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
H3f3cP02301 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
H3f3cP02301 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3f3cP02301 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H3f3cP02301 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
H3f3cP02301 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
H3f3cP02301 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.08■□□□□ 0.81
H3f3cP02301 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3f3cP02301 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.07■□□□□ 0.8
H3f3cP02301 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.07■□□□□ 0.8
H3f3cP02301 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3f3cP02301 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H3f3cP02301 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.06■□□□□ 0.8
H3f3cP02301 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
H3f3cP02301 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3f3cP02301 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H3f3cP02301 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3f3cP02301 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3cP02301 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.04■□□□□ 0.8
H3f3cP02301 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3f3cP02301 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3f3cP02301 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.03■□□□□ 0.8
H3f3cP02301 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.03■□□□□ 0.8
H3f3cP02301 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H3f3cP02301 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.03■□□□□ 0.8
H3f3cP02301 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
H3f3cP02301 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3f3cP02301 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.02■□□□□ 0.8
H3f3cP02301 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.02■□□□□ 0.8
H3f3cP02301 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H3f3cP02301 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H3f3cP02301 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.02■□□□□ 0.8
H3f3cP02301 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3f3cP02301 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
H3f3cP02301 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.01■□□□□ 0.79
H3f3cP02301 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
H3f3cP02301 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20■□□□□ 0.79
H3f3cP02301 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3f3cP02301 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20■□□□□ 0.79
H3f3cP02301 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
H3f3cP02301 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H3f3cP02301 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
H3f3cP02301 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3f3cP02301 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3f3cP02301 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3f3cP02301 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3f3cP02301 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3f3cP02301 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3f3cP02301 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
H3f3cP02301 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
H3f3cP02301 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3cP02301 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3cP02301 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3cP02301 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3f3cP02301 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3f3cP02301 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3f3cP02301 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3f3cP02301 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3cP02301 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.92■□□□□ 0.78
H3f3cP02301 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3f3cP02301 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3f3cP02301 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3f3cP02301 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3f3cP02301 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3f3cP02301 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3f3cP02301 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H3f3cP02301 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H3f3cP02301 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3f3cP02301 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3f3cP02301 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3f3cP02301 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
H3f3cP02301 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H3f3cP02301 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.85■□□□□ 0.77
H3f3cP02301 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
H3f3cP02301 Particl-201ENSMUST00000205370 1560 ntBASIC19.85■□□□□ 0.77
H3f3cP02301 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
H3f3cP02301 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
H3f3cP02301 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
H3f3cP02301 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.84■□□□□ 0.77
H3f3cP02301 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
H3f3cP02301 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3f3cP02301 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H3f3cP02301 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
H3f3cP02301 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
H3f3cP02301 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
H3f3cP02301 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
H3f3cP02301 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
H3f3cP02301 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.82■□□□□ 0.76
H3f3cP02301 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
H3f3cP02301 Gm7432-201ENSMUST00000210343 879 ntBASIC19.82■□□□□ 0.76
H3f3cP02301 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
H3f3cP02301 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms