Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.36■□□□□ 0.85
P01804 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01804 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P01804 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.34■□□□□ 0.85
P01804 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
P01804 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P01804 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P01804 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P01804 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.32■□□□□ 0.84
P01804 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01804 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01804 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01804 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01804 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P01804 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P01804 Particl-201ENSMUST00000205370 1560 ntBASIC20.29■□□□□ 0.84
P01804 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.29■□□□□ 0.84
P01804 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01804 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01804 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.28■□□□□ 0.84
P01804 Gm7432-201ENSMUST00000210343 879 ntBASIC20.28■□□□□ 0.84
P01804 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.27■□□□□ 0.84
P01804 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P01804 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
P01804 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01804 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01804 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01804 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01804 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P01804 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01804 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P01804 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.23■□□□□ 0.83
P01804 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
P01804 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.22■□□□□ 0.83
P01804 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.22■□□□□ 0.83
P01804 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P01804 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P01804 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01804 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01804 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.19■□□□□ 0.82
P01804 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01804 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01804 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P01804 Gm11599-201ENSMUST00000118720 878 ntBASIC20.16■□□□□ 0.82
P01804 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01804 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01804 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01804 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
P01804 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.14■□□□□ 0.81
P01804 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
P01804 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
P01804 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
P01804 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01804 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.11■□□□□ 0.81
P01804 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.11■□□□□ 0.81
P01804 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.11■□□□□ 0.81
P01804 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P01804 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01804 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
P01804 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01804 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01804 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01804 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01804 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
P01804 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P01804 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01804 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.08■□□□□ 0.81
P01804 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.08■□□□□ 0.81
P01804 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01804 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
P01804 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01804 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01804 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.06■□□□□ 0.8
P01804 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01804 Gm37136-201ENSMUST00000194368 194 ntBASIC20.05■□□□□ 0.8
P01804 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01804 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P01804 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01804 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms