Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.1■□□□□ 0.97
Lsm2O35900 Gm26115-201ENSMUST00000175605 87 ntBASIC21.1■□□□□ 0.97
Lsm2O35900 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm2O35900 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Lsm2O35900 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm2O35900 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Lsm2O35900 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm2O35900 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.08■□□□□ 0.97
Lsm2O35900 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Lsm2O35900 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Lsm2O35900 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Lsm2O35900 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lsm2O35900 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm2O35900 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lsm2O35900 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm2O35900 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm2O35900 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.06■□□□□ 0.96
Lsm2O35900 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Lsm2O35900 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm2O35900 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm2O35900 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm2O35900 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Lsm2O35900 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm2O35900 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm2O35900 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lsm2O35900 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm2O35900 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm2O35900 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm2O35900 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm2O35900 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.02■□□□□ 0.96
Lsm2O35900 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lsm2O35900 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lsm2O35900 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lsm2O35900 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm2O35900 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm2O35900 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm2O35900 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.99■□□□□ 0.95
Lsm2O35900 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm2O35900 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm2O35900 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm2O35900 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm2O35900 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.97■□□□□ 0.95
Lsm2O35900 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm2O35900 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.96■□□□□ 0.95
Lsm2O35900 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm2O35900 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm2O35900 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Lsm2O35900 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm2O35900 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm2O35900 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm2O35900 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm2O35900 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm2O35900 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm2O35900 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm2O35900 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm2O35900 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm2O35900 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm2O35900 Gm8109-201ENSMUST00000194076 746 ntBASIC20.94■□□□□ 0.94
Lsm2O35900 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm2O35900 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.93■□□□□ 0.94
Lsm2O35900 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm2O35900 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm2O35900 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm2O35900 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.92■□□□□ 0.94
Lsm2O35900 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm2O35900 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm2O35900 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm2O35900 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm2O35900 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm2O35900 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm2O35900 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm2O35900 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm2O35900 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm2O35900 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm2O35900 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm2O35900 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm2O35900 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm2O35900 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm2O35900 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm2O35900 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm2O35900 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm2O35900 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm2O35900 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm2O35900 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm2O35900 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm2O35900 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm2O35900 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Lsm2O35900 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm2O35900 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lsm2O35900 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm2O35900 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm2O35900 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm2O35900 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Lsm2O35900 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm2O35900 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Lsm2O35900 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.84■□□□□ 0.93
Lsm2O35900 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm2O35900 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm2O35900 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm2O35900 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms