Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav13d-3J3QMG8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav13d-3J3QMG8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav13d-3J3QMG8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav13d-3J3QMG8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav13d-3J3QMG8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav13d-3J3QMG8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav13d-3J3QMG8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav13d-3J3QMG8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trav13d-3J3QMG8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav13d-3J3QMG8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.8■□□□□ 0.92
Trav13d-3J3QMG8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trav13d-3J3QMG8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav13d-3J3QMG8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trav13d-3J3QMG8 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.79■□□□□ 0.92
Trav13d-3J3QMG8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.78■□□□□ 0.92
Trav13d-3J3QMG8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.78■□□□□ 0.92
Trav13d-3J3QMG8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav13d-3J3QMG8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav13d-3J3QMG8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trav13d-3J3QMG8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav13d-3J3QMG8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav13d-3J3QMG8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trav13d-3J3QMG8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav13d-3J3QMG8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Trav13d-3J3QMG8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav13d-3J3QMG8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.73■□□□□ 0.91
Trav13d-3J3QMG8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trav13d-3J3QMG8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.72■□□□□ 0.91
Trav13d-3J3QMG8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav13d-3J3QMG8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav13d-3J3QMG8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav13d-3J3QMG8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav13d-3J3QMG8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trav13d-3J3QMG8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav13d-3J3QMG8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Trav13d-3J3QMG8 Gm6821-201ENSMUST00000107540 542 ntBASIC20.7■□□□□ 0.9
Trav13d-3J3QMG8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav13d-3J3QMG8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav13d-3J3QMG8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.69■□□□□ 0.9
Trav13d-3J3QMG8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trav13d-3J3QMG8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav13d-3J3QMG8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav13d-3J3QMG8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trav13d-3J3QMG8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav13d-3J3QMG8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.67■□□□□ 0.9
Trav13d-3J3QMG8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav13d-3J3QMG8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav13d-3J3QMG8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav13d-3J3QMG8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.66■□□□□ 0.9
Trav13d-3J3QMG8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.66■□□□□ 0.9
Trav13d-3J3QMG8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trav13d-3J3QMG8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav13d-3J3QMG8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.65■□□□□ 0.9
Trav13d-3J3QMG8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.65■□□□□ 0.9
Trav13d-3J3QMG8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trav13d-3J3QMG8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.65■□□□□ 0.9
Trav13d-3J3QMG8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav13d-3J3QMG8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav13d-3J3QMG8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.63■□□□□ 0.89
Trav13d-3J3QMG8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav13d-3J3QMG8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav13d-3J3QMG8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trav13d-3J3QMG8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav13d-3J3QMG8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav13d-3J3QMG8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav13d-3J3QMG8 Gm8503-201ENSMUST00000118131 455 ntBASIC20.6■□□□□ 0.89
Trav13d-3J3QMG8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.6■□□□□ 0.89
Trav13d-3J3QMG8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trav13d-3J3QMG8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav13d-3J3QMG8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav13d-3J3QMG8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Particl-201ENSMUST00000205370 1560 ntBASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav13d-3J3QMG8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav13d-3J3QMG8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trav13d-3J3QMG8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.58■□□□□ 0.89
Trav13d-3J3QMG8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav13d-3J3QMG8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trav13d-3J3QMG8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav13d-3J3QMG8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav13d-3J3QMG8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav13d-3J3QMG8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trav13d-3J3QMG8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav13d-3J3QMG8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav13d-3J3QMG8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav13d-3J3QMG8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav13d-3J3QMG8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav13d-3J3QMG8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav13d-3J3QMG8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav13d-3J3QMG8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trav13d-3J3QMG8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav13d-3J3QMG8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav13d-3J3QMG8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav13d-3J3QMG8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav13d-3J3QMG8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 186.7 ms