Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv2-1A0A0G2JGB9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trdv2-1A0A0G2JGB9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.21■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.21■□□□□ 0.35
Trdv2-1A0A0G2JGB9 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.21■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.2■□□□□ 0.34
Trdv2-1A0A0G2JGB9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv2-1A0A0G2JGB9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.17■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv2-1A0A0G2JGB9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.14■□□□□ 0.34
Trdv2-1A0A0G2JGB9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Gm27322-201ENSMUST00000184007 104 ntBASIC17.12■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trdv2-1A0A0G2JGB9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.08■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.04■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.04■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms