Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
CTDP1Q9Y5B0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 LINC01963-201ENST00000562038 3148 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC087516.1-201ENST00000561236 2428 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 RNU5B-4P-201ENST00000363508 111 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 RNA5SP234-201ENST00000363916 119 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 SNORD116-8-201ENST00000384365 95 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC119751.3-201ENST00000399720 670 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 SKINT1L-201ENST00000401057 817 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AL078595.1-201ENST00000404458 226 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 RNA5SP251-201ENST00000410614 137 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 RPL5P2-201ENST00000429598 854 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 HIGD1AP4-201ENST00000430194 280 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 VN1R108P-201ENST00000431580 830 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 MTND4P32-201ENST00000437189 1237 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC044797.1-201ENST00000445744 679 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 MTND1P29-201ENST00000448112 647 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC011225.1-201ENST00000457751 369 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC010468.1-201ENST00000461022 817 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 RPL21P18-201ENST00000469899 480 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 COPS8P2-201ENST00000473228 627 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 RNA5SP92-201ENST00000516437 110 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC020937.1-201ENST00000519677 1013 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC025470.1-201ENST00000510053 2032 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 AC003985.2-201ENST00000562268 1669 ntBASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CTDP1Q9Y5B0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 MTND4P8-201ENST00000514997 1362 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC010266.2-201ENST00000564741 3255 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RNU6-171P-201ENST00000384354 107 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RNU6-1263P-201ENST00000384601 106 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RNA5SP91-201ENST00000390902 119 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 SPTLC1P2-201ENST00000407089 121 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 SLC35E1P1-201ENST00000419313 864 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 KRR1P1-201ENST00000419430 803 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 OR6D1P-201ENST00000436165 939 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RPL23AP23-201ENST00000452590 471 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RN7SL172P-201ENST00000460535 303 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RN7SL610P-201ENST00000463845 291 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 RN7SL447P-201ENST00000494711 245 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 IGLV3-24-201ENST00000517477 197 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 PMS2P3-207ENST00000529061 717 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 HAUS8P1-201ENST00000549005 542 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms