Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ATG10-AS1-201ENST00000504846 648 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC020978.7-201ENST00000575953 1187 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 MTND2P13-201ENST00000577438 1039 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 BNIP3P7-201ENST00000605641 516 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC126175.1-201ENST00000617041 758 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 SNORA17.5-201ENST00000630429 132 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 MTND4P26-201ENST00000415971 1359 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 OR10J6P-201ENST00000289731 930 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RN7SKP15-201ENST00000364742 309 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 SNORA70.10-201ENST00000384515 134 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RN7SKP293-201ENST00000411389 296 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RPL35AP24-201ENST00000413846 330 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 OR51A6P-201ENST00000418680 1004 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RPS12P5-201ENST00000423449 371 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC108075.1-201ENST00000424692 529 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RPL7L1P9-201ENST00000431298 745 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RPS29P9-201ENST00000440360 171 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 CCRL1P1-201ENST00000449542 1053 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RHEBP2-201ENST00000450289 600 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC037198.2-201ENST00000478845 733 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 RPL7P51-201ENST00000490532 749 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC104109.1-201ENST00000498563 436 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC073358.1-201ENST00000505671 684 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 MIR4675-201ENST00000577898 77 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC009643.2-201ENST00000603543 1448 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AL672167.1-205ENST00000641112 3080 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 MAPK10-320ENST00000641462 6696 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AL606537.1-201ENST00000607258 2011 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 AC087565.3-202ENST00000642085 1603 ntBASIC4.43□□□□□ -1.7
COPS3Q9UNS2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.43□□□□□ -1.7
COPS3Q9UNS2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 AC010132.2-201ENST00000295493 1043 ntBASIC4.42□□□□□ -1.7
COPS3Q9UNS2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 IL6STP1-201ENST00000346911 1020 ntBASIC4.42□□□□□ -1.7
COPS3Q9UNS2 RNA5SP183-201ENST00000362452 119 ntBASIC4.42□□□□□ -1.7
COPS3Q9UNS2 SNORA73.1-201ENST00000363107 205 ntBASIC4.42□□□□□ -1.7
COPS3Q9UNS2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPS3Q9UNS2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms