Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 IRF5P1-201ENST00000504852 2164 ntBASIC4.67□□□□□ -1.66
NPIPA1Q9UND3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 RNU1-74P-201ENST00000384108 171 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC104297.1-201ENST00000393779 870 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 COX5BP7-201ENST00000414780 274 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AL691447.1-201ENST00000419456 387 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AL392003.1-201ENST00000434394 243 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 HMGB3P10-201ENST00000434734 572 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC046176.1-201ENST00000435260 1170 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 H2AFZP6-201ENST00000444403 394 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 BX842559.2-201ENST00000451418 605 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC091180.1-201ENST00000462104 372 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC092324.1-201ENST00000468671 324 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC140172.1-201ENST00000502928 141 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC092593.2-201ENST00000513866 913 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 SEC11B-201ENST00000518383 499 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC100784.1-201ENST00000522790 310 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC027281.1-201ENST00000574178 758 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 AC087385.3-201ENST00000620477 187 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 MAPK10-328ENST00000641553 4009 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 TCP1P3-201ENST00000414406 1498 ntBASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA1Q9UND3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 STX3-208ENST00000641815 3236 ntBASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA1Q9UND3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 RN7SKP95-201ENST00000362860 303 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 RNU4-44P-201ENST00000363050 141 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 SNORA56-201ENST00000383966 129 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 SNORA66-201ENST00000384792 133 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AC233289.1-201ENST00000403700 508 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AL390316.1-201ENST00000406279 553 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AL358178.1-201ENST00000407698 397 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AC007064.3-201ENST00000422608 359 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AJ239321.1-201ENST00000424255 564 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 HMGN2P27-201ENST00000427352 270 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 RHOT1P3-201ENST00000436571 331 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 RPL34P20-201ENST00000442771 351 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 CYCSP24-201ENST00000445119 316 ntBASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA1Q9UND3 RPL31P20-201ENST00000449593 360 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms