Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 UBBP2-201ENST00000376781 231 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 SNORA70F-201ENST00000384142 135 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 RN7SL346P-201ENST00000491561 294 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 RAB9BP1-201ENST00000519581 626 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC018690.1-201ENST00000608144 626 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 STX3-208ENST00000641815 3236 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC008549.2-201ENST00000333482 706 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 MIR589-201ENST00000385238 99 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AL359643.1-201ENST00000404109 423 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC016397.1-201ENST00000412463 242 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AL807761.1-201ENST00000417622 171 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 FABP7P1-201ENST00000424004 391 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AL049745.1-201ENST00000433953 286 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 NDUFA12P1-201ENST00000455914 406 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC091180.1-201ENST00000462104 372 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC133555.2-201ENST00000550213 292 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC88CQ9P219 AC093908.1-201ENST00000623125 8092 ntBASIC4.56□□□□□ -1.68
CCDC88CQ9P219 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL731566.1-201ENST00000620490 1937 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC009480.2-201ENST00000422916 432 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 COX6CP13-201ENST00000428703 226 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC007559.1-201ENST00000428736 355 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC097523.2-201ENST00000435551 652 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL138878.2-201ENST00000440581 1241 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 NUTF2P7-201ENST00000453086 375 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RN7SL189P-201ENST00000468631 289 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RPL12P20-201ENST00000475538 479 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC007497.1-201ENST00000610421 561 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 MIR6798-201ENST00000612887 67 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC114781.5-201ENST00000615297 108 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AP000843.1-201ENST00000624880 701 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL445487.1-201ENST00000415694 1580 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 FAM3C2-201ENST00000312214 681 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL021331.1-201ENST00000402817 582 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 TMBIM7P-201ENST00000418074 855 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 CBX1P1-201ENST00000440184 427 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RPL36AP15-201ENST00000444514 266 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms