Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-517P-201ENST00000384362 110 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-1320P-201ENST00000390838 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-1269P-201ENST00000391139 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AL590084.1-201ENST00000407885 387 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AL390774.1-201ENST00000411924 246 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 NME1P1-201ENST00000420914 382 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC011233.1-201ENST00000422812 283 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 IFNNP1-201ENST00000429219 553 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 MTATP6P23-201ENST00000440153 476 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 CYCSP42-201ENST00000450823 238 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-599P-201ENST00000459383 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-1193P-201ENST00000459461 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 BZW1P2-201ENST00000473537 826 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 SIAH1P1-201ENST00000479411 923 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RN7SL570P-201ENST00000484405 292 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RPS27AP16-201ENST00000492222 470 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC021087.2-201ENST00000504656 1203 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-720P-201ENST00000516363 108 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AP001804.1-201ENST00000526868 919 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC126615.2-201ENST00000553003 515 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC007225.2-201ENST00000562529 256 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC010547.7-201ENST00000570323 333 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC015688.2-201ENST00000584523 262 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RN7SKP299-201ENST00000606679 301 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC122133.1-201ENST00000613964 233 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 U6.42-201ENST00000618440 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC018755.4-201ENST00000619715 454 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-368P-201ENST00000620928 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 RNU6-538P-201ENST00000622329 107 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC092656.1-203ENST00000624134 423 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 CASC19-248ENST00000641674 1356 ntBASIC6.42□□□□□ -1.38
BCAS3Q9H6U6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AP004289.1-201ENST00000436307 2205 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RNA5SP234-201ENST00000363916 119 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RNU6-553P-201ENST00000364047 96 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RNU1-59P-201ENST00000364829 162 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RNA5SP30-201ENST00000365552 115 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 MIR143-201ENST00000385300 106 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 Y_RNA.578-201ENST00000390903 88 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC092638.1-201ENST00000411966 1275 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC098592.2-201ENST00000413158 265 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 NPM1P4-201ENST00000414095 812 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AL133173.1-201ENST00000423458 397 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 MTND1P32-201ENST00000433043 938 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC096775.1-201ENST00000437724 448 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AL450023.1-201ENST00000450868 751 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms