Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NUDT19P3-201ENST00000404698 555 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL589823.1-201ENST00000429577 183 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 FTLP19-201ENST00000433300 394 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RPS25P9-201ENST00000435591 252 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 GAPDHP20-201ENST00000444107 1007 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC084754.1-201ENST00000463466 464 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC010307.1-201ENST00000467206 836 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 SETP14-201ENST00000497538 873 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC122718.2-201ENST00000505325 591 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC112198.1-201ENST00000505369 1220 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 MTND4LP31-201ENST00000514859 294 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RNA5SP318-201ENST00000516352 92 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RNU6-347P-201ENST00000516658 105 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RNU6-678P-201ENST00000516832 109 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AF279873.1-201ENST00000523393 313 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AP001207.1-201ENST00000524051 481 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 ACTR3BP3-201ENST00000565577 979 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 OR1E3-201ENST00000575608 948 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AP001981.2-201ENST00000603241 418 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC012175.1-201ENST00000603755 531 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AP000811.1-201ENST00000603803 651 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC091488.1-201ENST00000604239 660 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC073114.1-201ENST00000612027 490 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 MIR6071-201ENST00000616741 78 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AC116563.2-201ENST00000624751 535 ntBASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM55Q9BYV6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM55Q9BYV6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM55Q9BYV6 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM55Q9BYV6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 RNU6-623P-201ENST00000363143 105 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 SUGT1P1-201ENST00000379514 476 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 HSFY4P-201ENST00000415994 1181 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC010153.1-201ENST00000432862 727 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC007383.1-201ENST00000445875 636 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC092967.1-201ENST00000449016 481 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 RPL26P30-201ENST00000453533 435 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 RNU6-1218P-201ENST00000458990 108 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 RPL7P1-201ENST00000468161 747 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 RPL7P9-201ENST00000468715 747 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 RPL7P6-201ENST00000480903 738 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MTCYBP37-201ENST00000510642 1133 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC093664.1-201ENST00000511779 289 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 OR52H2P-201ENST00000514607 902 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC011853.1-201ENST00000518911 454 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 IGKV1D-22-201ENST00000518953 324 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms