Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC098935.2-201ENST00000604222 466 ntBASIC6.65□□□□□ -1.35
CCDC7Q96M83 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CCDC7Q96M83 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CCDC7Q96M83 TCP11X1-202ENST00000622971 1372 ntBASIC6.65□□□□□ -1.35
CCDC7Q96M83 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 AL121950.1-201ENST00000624993 2077 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 UBBP2-201ENST00000376781 231 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 NRBF2P3-201ENST00000432731 865 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC104971.1-201ENST00000495117 578 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 RN7SKP276-201ENST00000516242 268 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 SS18L2P2-201ENST00000583960 235 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 IMMP1LP1-201ENST00000605170 488 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC068831.8-201ENST00000620171 435 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC021106.3-201ENST00000623925 531 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 SALL4P2-201ENST00000423288 2910 ntBASIC6.64□□□□□ -1.35
CCDC7Q96M83 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC7Q96M83 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC7Q96M83 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 AL049693.1-201ENST00000402760 611 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 AL592291.1-201ENST00000403830 352 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 AC005154.2-201ENST00000438110 379 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 AC079168.2-201ENST00000453977 416 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 AC006338.2-201ENST00000616864 791 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 AC007382.1-201ENST00000624376 2618 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 KARSP3-201ENST00000571212 1504 ntBASIC6.63□□□□□ -1.35
CCDC7Q96M83 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC7Q96M83 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC7Q96M83 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC7Q96M83 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 RNU1-82P-201ENST00000390851 165 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 AL590762.2-201ENST00000395798 571 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 SEPT7P2-202ENST00000398921 823 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 RSL24D1P6-201ENST00000426934 401 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC7Q96M83 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 RPL12P20-201ENST00000475538 479 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 AC023424.1-201ENST00000496058 459 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 RN7SKP92-201ENST00000517266 244 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 AC133555.2-201ENST00000550213 292 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 FAM27B-201ENST00000610601 213 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 MIR8069-1-201ENST00000616627 86 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 MIR8069-2-201ENST00000621412 86 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 AC015871.5-202ENST00000623252 701 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 AL442639.1-201ENST00000625030 1899 ntBASIC6.62□□□□□ -1.35
CCDC7Q96M83 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC7Q96M83 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC7Q96M83 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC7Q96M83 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC7Q96M83 ZFRP1-201ENST00000457579 2970 ntBASIC6.61□□□□□ -1.35
CCDC7Q96M83 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC7Q96M83 AC010928.1-201ENST00000592477 1447 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms