Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SNORA31.13-201ENST00000516624 135 ntBASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 AP003717.3-201ENST00000544832 1180 ntBASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 AC012254.4-201ENST00000588843 273 ntBASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 BNIP3P32-201ENST00000600015 554 ntBASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 AC104695.2-201ENST00000605056 775 ntBASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP3Q96JB5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SKP199-201ENST00000410325 305 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC010385.1-201ENST00000412374 256 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC009506.2-201ENST00000420635 840 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 HSPE1P16-201ENST00000426640 348 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 GSTM5P1-201ENST00000434751 660 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AL390119.1-201ENST00000440329 312 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AP000281.1-201ENST00000444036 316 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AL672138.1-201ENST00000450604 1015 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC083899.1-201ENST00000454465 3819 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 SETP20-201ENST00000457046 852 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC092754.1-201ENST00000472975 479 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC090638.1-201ENST00000498296 909 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC091163.3-201ENST00000518269 1144 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 HIGD1AP18-201ENST00000520730 278 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 MIR7853-201ENST00000584820 132 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AP000769.2-201ENST00000602344 396 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AL357094.1-201ENST00000603845 844 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC093673.2-201ENST00000609674 331 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AL157392.4-201ENST00000609756 345 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC132825.7-201ENST00000638744 335 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 BRAFP1-201ENST00000445336 2703 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 AC016745.2-201ENST00000608834 3443 ntBASIC6.11□□□□□ -1.43
CDK5RAP3Q96JB5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 CASC19-248ENST00000641674 1356 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC006206.1-201ENST00000544842 3387 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SKP124-201ENST00000364730 341 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 OR6K4P-201ENST00000423179 955 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC009784.1-201ENST00000426484 460 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AL035458.1-201ENST00000433096 585 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 NPM1P18-201ENST00000434232 732 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AP000936.3-201ENST00000438127 255 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 MTCO1P53-201ENST00000441633 699 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC105399.1-202ENST00000447303 205 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AL096803.2-201ENST00000450032 677 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RPS27AP2-201ENST00000457576 465 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RPS20P4-201ENST00000461659 355 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SL717P-201ENST00000478343 297 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SL273P-201ENST00000481561 299 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SL466P-201ENST00000497546 295 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC104109.1-201ENST00000498563 436 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms