Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 AC051619.2-201ENST00000559063 397 ntBASIC5.6□□□□□ -1.51
RNF31Q96EP0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 AL354943.1-201ENST00000572103 781 ntBASIC5.6□□□□□ -1.51
RNF31Q96EP0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 AC025857.2-201ENST00000602711 238 ntBASIC5.6□□□□□ -1.51
RNF31Q96EP0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 AP000255.1-201ENST00000610276 676 ntBASIC5.6□□□□□ -1.51
RNF31Q96EP0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 VIS1.1-201ENST00000610517 203 ntBASIC5.6□□□□□ -1.51
RNF31Q96EP0 AL121890.3-201ENST00000618494 516 ntBASIC5.6□□□□□ -1.51
RNF31Q96EP0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF31Q96EP0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RNF31Q96EP0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AP000473.2-201ENST00000602659 1537 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 KYNUP3-201ENST00000574386 1341 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 Y_RNA.201-201ENST00000364052 96 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL391361.1-201ENST00000405580 489 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL354868.1-201ENST00000417077 482 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 RPS4XP5-201ENST00000419038 768 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL365220.1-201ENST00000432923 399 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 HSFY3P-201ENST00000444242 1191 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL022237.1-201ENST00000446663 358 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL157827.1-201ENST00000447622 132 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL445687.2-201ENST00000458156 728 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 RN7SL515P-201ENST00000463999 297 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL035690.1-201ENST00000490892 383 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 RN7SKP34-201ENST00000516142 244 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC013701.1-201ENST00000522657 465 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC008126.1-201ENST00000549019 480 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC011611.5-201ENST00000552477 578 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC090888.1-201ENST00000561335 1141 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC135628.1-201ENST00000568867 534 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC104695.2-201ENST00000605056 775 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC067838.1-201ENST00000606064 577 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AL583856.2-201ENST00000606298 543 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC016877.3-201ENST00000606778 504 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC024257.5-201ENST00000612739 531 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 MIR6719-201ENST00000622428 87 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF31Q96EP0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF31Q96EP0 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
RNF31Q96EP0 AP004607.3-201ENST00000530354 3915 ntBASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms