Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RPS5P7-201ENST00000456664 608 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 COX6B1P2-201ENST00000489624 230 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AC005868.1-201ENST00000536421 331 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AC022726.1-201ENST00000587475 207 ntBASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ECHDC3Q96DC8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC100778.3-201ENST00000580060 1750 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 PCAT14-202ENST00000627127 3935 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AL672167.2-201ENST00000377164 879 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 VDAC2P1-201ENST00000399358 958 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 OR13Z1P-201ENST00000416141 834 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 NRBF2P3-201ENST00000432731 865 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 CYCSP11-201ENST00000436426 315 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC006466.1-201ENST00000438721 289 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC010733.1-201ENST00000451515 401 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 IGKV1-32-201ENST00000519290 311 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 MIR5699-201ENST00000578903 90 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC091042.1-201ENST00000579213 173 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 SNORA74C-1-201ENST00000580726 201 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC116651.1-201ENST00000609724 556 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 BNIP3P41-202ENST00000616656 861 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AC006453.5-201ENST00000636451 619 ntBASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ECHDC3Q96DC8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 TLK1P1-201ENST00000456760 2440 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC017079.1-201ENST00000333650 415 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 RNVU1-6-201ENST00000364688 164 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 BMS1P3-201ENST00000372011 932 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AL035419.1-201ENST00000397037 564 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AL139128.1-201ENST00000413921 941 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 OR1H1P-201ENST00000448731 937 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AL591363.1-201ENST00000450091 483 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC104971.1-201ENST00000495117 578 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 OR7H2P-201ENST00000513483 306 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 RNU6-709P-201ENST00000517257 104 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AP006245.2-201ENST00000522004 300 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 EIF4EP5-201ENST00000528228 640 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AP001880.2-201ENST00000538233 448 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC018552.1-201ENST00000562099 811 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms