Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL139254.3-201ENST00000641097 674 ntBASIC7.74□□□□□ -1.17
TOPBP1Q92547 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 AC020656.2-201ENST00000613291 5309 ntBASIC7.74□□□□□ -1.17
TOPBP1Q92547 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 BTF3P10-201ENST00000433415 495 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 AL132838.2-201ENST00000492041 314 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 HNRNPRP2-201ENST00000528421 743 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC090515.3-201ENST00000560431 315 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 AGGF1P9-201ENST00000561884 913 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC020634.1-201ENST00000608701 549 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 MIR6867-201ENST00000610636 67 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 SCARNA15-201ENST00000607520 4325 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 AL161912.2-201ENST00000565707 3007 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AL137141.1-201ENST00000624622 4836 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 RNA5SP387-201ENST00000364226 106 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 NFYAP1-201ENST00000431953 972 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 MTND2P40-201ENST00000436718 841 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
TOPBP1Q92547 AC011815.3-201ENST00000624194 473 ntBASIC7.73□□□□□ -1.17
TOPBP1Q92547 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOPBP1Q92547 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 AL355834.1-201ENST00000556602 3965 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 SNORA11C-201ENST00000408532 129 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC009237.10-201ENST00000414112 510 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC009237.5-201ENST00000414271 501 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 AL139095.3-201ENST00000419672 1203 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 RN7SL132P-201ENST00000478131 296 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 FKBP1BP1-201ENST00000553366 325 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
TOPBP1Q92547 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 MIR6891-201ENST00000618788 93 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 AC009120.7-201ENST00000623452 780 ntBASIC7.72□□□□□ -1.17
TOPBP1Q92547 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOPBP1Q92547 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.71□□□□□ -1.17
TOPBP1Q92547 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TOPBP1Q92547 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.71□□□□□ -1.17
TOPBP1Q92547 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TOPBP1Q92547 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TOPBP1Q92547 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC108467.2-201ENST00000617640 1597 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.71□□□□□ -1.18
TOPBP1Q92547 HNRNPCP4-201ENST00000571636 900 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 RN7SL600P-201ENST00000581811 299 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC113403.1-201ENST00000604910 193 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC004777.1-201ENST00000624317 287 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 CDRT1-208ENST00000630868 794 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 AC140479.6-201ENST00000633535 357 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.71□□□□□ -1.18
TOPBP1Q92547 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOPBP1Q92547 AL591135.1-201ENST00000401578 5914 ntBASIC7.71□□□□□ -1.18
TOPBP1Q92547 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TOPBP1Q92547 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TOPBP1Q92547 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms