Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL627224.1-201ENST00000448334 444 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 RN7SL447P-201ENST00000494711 245 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 RN7SKP34-201ENST00000516142 244 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 NDUFB4P11-201ENST00000560510 395 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC116553.2-201ENST00000564203 463 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC126365.2-201ENST00000580630 379 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AP002884.5-201ENST00000595053 1132 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC018645.2-201ENST00000609151 472 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC110792.4-201ENST00000609843 298 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AL512624.1-201ENST00000613638 469 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC022467.1-201ENST00000614738 749 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC022306.3-201ENST00000619930 550 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AL691477.1-201ENST00000624398 162 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC132825.1-201ENST00000463573 2247 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC010132.2-201ENST00000295493 1043 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 SNORA63.3-201ENST00000362682 132 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AL353692.2-201ENST00000407054 335 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 EI24P4-201ENST00000423683 1078 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 UBE2D3P3-201ENST00000426992 425 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC012075.1-201ENST00000436549 580 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC004980.3-201ENST00000447046 365 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 RPEP1-201ENST00000504507 658 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 MTCO1P31-201ENST00000506355 492 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 RNU6-941P-201ENST00000516346 108 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC027308.1-201ENST00000517993 110 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AP000859.1-201ENST00000525536 307 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC005242.1-201ENST00000585658 438 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 BNIP3P31-201ENST00000604515 566 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC015871.5-202ENST00000623252 701 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC135068.12-201ENST00000637370 931 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 AC074101.1-201ENST00000637861 241 ntBASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A1Q8WWI5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 AP001642.1-201ENST00000624727 2117 ntBASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 UBBP2-201ENST00000376781 231 ntBASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 SNORA2.3-201ENST00000383920 135 ntBASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 AL391422.1-201ENST00000402155 436 ntBASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 NUDT19P3-201ENST00000404698 555 ntBASIC5.12□□□□□ -1.59
SLC44A1Q8WWI5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms