Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGB4Q8WW32 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMGB4Q8WW32 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMGB4Q8WW32 RLIMP2-201ENST00000427891 1563 ntBASIC5.46□□□□□ -1.53
HMGB4Q8WW32 AL353796.1-201ENST00000561542 3241 ntBASIC5.46□□□□□ -1.53
HMGB4Q8WW32 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
HMGB4Q8WW32 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMGB4Q8WW32 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMGB4Q8WW32 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
HMGB4Q8WW32 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 HMGB3P7-201ENST00000400214 611 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 RBMY2KP-201ENST00000418221 992 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC021876.1-201ENST00000425959 359 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 RPS4XP16-201ENST00000427198 791 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC000041.1-201ENST00000439655 175 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC092647.3-201ENST00000443044 633 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC092685.1-201ENST00000447960 1243 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 RPL12P39-201ENST00000455456 496 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC110775.1-201ENST00000513721 462 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AP004607.2-201ENST00000533949 322 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC137627.1-201ENST00000545761 289 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 CYB5AP5-201ENST00000549779 389 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MTND1P24-201ENST00000552175 861 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MIR4509-3-201ENST00000578671 94 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MIR4509-2-201ENST00000583920 94 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 SS18L2P2-201ENST00000583960 235 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC093673.2-201ENST00000609674 331 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 CYCSP41-201ENST00000616920 296 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MIR4509-1-201ENST00000618224 94 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 LINC01739-205ENST00000641890 573 ntBASIC5.46□□□□□ -1.54
HMGB4Q8WW32 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGB4Q8WW32 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC104964.3-201ENST00000606115 2860 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AL121886.1-201ENST00000358609 435 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RNU4-4P-201ENST00000364588 130 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RPL23AP17-201ENST00000401064 499 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RNA5SP487-201ENST00000410186 122 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RNA5SP498-201ENST00000411342 120 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 HMGB3P31-201ENST00000413333 595 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RNF10P1-201ENST00000418589 369 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC073410.1-201ENST00000435125 589 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 OFD1P3Y-201ENST00000453312 783 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 Z95152.1-201ENST00000453556 656 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms