Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC005086.4-201ENST00000623065 213 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 THAP12P8-201ENST00000447914 2115 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC005332.5-201ENST00000591222 2919 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 MTCO1P22-201ENST00000604619 1360 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 IL6STP1-201ENST00000346911 1020 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AL021331.1-201ENST00000402817 582 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 RN7SKP293-201ENST00000411389 296 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 SEPT7P8-201ENST00000413308 775 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC096644.3-201ENST00000416788 338 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 PPIAP13-201ENST00000434706 478 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 PPIAP19-201ENST00000486414 492 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 DEFB109F-201ENST00000491870 277 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC104971.1-201ENST00000495117 578 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 GSTP1P1-201ENST00000548078 319 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC005520.3-201ENST00000602874 370 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AL589674.2-201ENST00000604304 337 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC126175.1-201ENST00000617041 758 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 AC099494.2-201ENST00000623371 978 ntBASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUDCD3Q8IVD9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC120338.1-201ENST00000625074 1541 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 RNA5SP183-201ENST00000362452 119 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 DUTP5-201ENST00000406790 469 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC009237.10-201ENST00000414112 510 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 TBCAP2-201ENST00000416175 326 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 VN1R37P-201ENST00000419096 748 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 MTND4LP12-201ENST00000448237 295 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 HSPE1P22-201ENST00000456856 327 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC097484.1-201ENST00000471148 389 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC117394.1-201ENST00000477323 567 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 RN7SL244P-201ENST00000493405 297 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 PGAM1P13-201ENST00000507497 754 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 MTCO3P42-201ENST00000509488 518 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 MTCO3P39-201ENST00000514812 518 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 OR7E128P-201ENST00000532736 1024 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AP001804.2-201ENST00000533932 910 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AL049779.2-201ENST00000553847 315 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms