Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PARP4P1-201ENST00000435945 2337 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC112243.1-201ENST00000623949 3851 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RNA5SP188-201ENST00000362916 129 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RNU6-501P-201ENST00000364072 100 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RNU6-1251P-201ENST00000364502 107 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RN7SKP191-201ENST00000364713 306 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RNU6-877P-201ENST00000383868 107 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RNU1-46P-201ENST00000384425 164 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL590635.1-201ENST00000406314 586 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 MIR1266-201ENST00000408125 84 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 MTND3P17-201ENST00000416968 344 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 USP9YP27-201ENST00000418455 438 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AHCYP8-201ENST00000425108 209 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 VN1R20P-201ENST00000425215 966 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPL12P49-201ENST00000441100 121 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPL31P15-201ENST00000449770 338 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPS4XP12-201ENST00000461747 709 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RN7SL70P-201ENST00000478322 302 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPS4XP17-201ENST00000479057 754 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPS7P6-201ENST00000485777 579 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 FAM172BP-201ENST00000487497 1089 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC108078.1-201ENST00000508073 725 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 FGF7P4-201ENST00000509595 295 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL390198.2-201ENST00000510553 222 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 OR52K3P-201ENST00000531655 943 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 PCMTD1P2-201ENST00000565017 355 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RN7SL66P-201ENST00000582099 264 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPS4XP21-201ENST00000603814 750 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 YWHAEP7-203ENST00000622054 312 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC024940.5-201ENST00000622889 474 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 TNPO1P2-201ENST00000426249 2665 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 CASC19-228ENST00000641414 1684 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 MTCO1P11-201ENST00000429111 1528 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AL359694.2-201ENST00000567753 1615 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG4DQ86TL0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
ATG4DQ86TL0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC005034.3-201ENST00000604845 1747 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 UGT2B24P-201ENST00000514441 1597 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms