Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1170P-201ENST00000515974 106 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AP005902.2-201ENST00000518393 307 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC008429.4-201ENST00000521201 182 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 FO082796.1-201ENST00000523795 183 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AP001803.1-201ENST00000525668 147 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AP001189.2-201ENST00000527320 189 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC018558.5-201ENST00000565840 952 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC141257.3-201ENST00000572906 215 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 NRBF2P1-201ENST00000587407 859 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC245014.2-201ENST00000603689 287 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 NDUFB9P1-201ENST00000604683 510 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC246785.4-201ENST00000605374 287 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC063962.1-201ENST00000608199 521 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 CASC19-232ENST00000641480 1244 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 MAPK10-383ENST00000642032 3390 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 CDR1-202ENST00000625883 1485 ntBASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LYSMD3Q7Z3D4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC011155.1-201ENST00000316512 456 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 MIR369-201ENST00000362155 70 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 Y_RNA.384-201ENST00000383909 102 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RNU6-784P-201ENST00000384330 106 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL589647.1-201ENST00000402485 466 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 TXNP7-201ENST00000406296 293 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL139100.1-201ENST00000408001 498 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RN7SKP232-201ENST00000410170 290 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RN7SKP129-201ENST00000410288 299 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 Y_RNA.608-201ENST00000410647 95 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL662791.3-201ENST00000413771 776 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 VDAC1P10-201ENST00000416715 891 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL358176.2-201ENST00000425769 204 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC007559.1-201ENST00000428736 355 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 MTND6P18-201ENST00000439477 513 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 Z98949.2-201ENST00000440996 144 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 SNORD19B-201ENST00000459623 84 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RPSAP48-201ENST00000466509 889 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL591122.1-201ENST00000487348 492 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 SUMO2P7-201ENST00000511179 285 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 MTND5P4-201ENST00000514978 288 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 Y_RNA.711-201ENST00000516993 102 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RNU2-46P-201ENST00000517038 113 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AP003467.2-201ENST00000520175 319 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC107952.1-201ENST00000524200 376 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 PHBP17-201ENST00000528576 541 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AP000790.1-201ENST00000528891 737 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 MIR4503-201ENST00000582187 83 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC004908.2-201ENST00000609090 574 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC068831.8-201ENST00000620171 435 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC015908.5-201ENST00000623289 343 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC100810.6-201ENST00000638068 285 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 MKKS-204ENST00000639674 192 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms