Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SCARNA20.4-201ENST00000516969 131 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 IGKV2-36-201ENST00000519999 223 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN1BQ07699 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC063949.1-201ENST00000552900 865 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC068446.3-201ENST00000555285 382 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN1BQ07699 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC092474.3-201ENST00000603022 568 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC104118.1-201ENST00000607625 1589 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC009318.3-201ENST00000616916 503 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC073593.1-201ENST00000624500 411 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 CR392039.4-201ENST00000624968 501 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC022919.1-201ENST00000624979 626 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN1BQ07699 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN1BQ07699 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN1BQ07699 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SCN1BQ07699 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
SCN1BQ07699 SSXP3-201ENST00000442971 1300 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
SCN1BQ07699 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 VN2R3P-201ENST00000422626 1412 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SCN1BQ07699 RNA5SP500-201ENST00000364486 119 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC013442.1-201ENST00000397347 228 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 MIR1203-201ENST00000408812 85 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AP000357.1-201ENST00000409926 1165 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 RN7SKP247-201ENST00000411094 308 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 Z68694.1-201ENST00000413929 841 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AL035660.1-201ENST00000422041 222 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.75□□□□□ -1.65
SCN1BQ07699 DYNLL1P7-201ENST00000429273 258 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 ARL5AP2-201ENST00000444698 533 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 RN7SL168P-201ENST00000463821 279 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SCN1BQ07699 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.75□□□□□ -1.65
SCN1BQ07699 RN7SL649P-201ENST00000496974 275 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC006499.4-201ENST00000510947 694 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC010285.3-201ENST00000511668 676 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN1BQ07699 RNA5SP303-201ENST00000516192 130 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 VTA1P2-201ENST00000520205 911 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 OR5AK3P-201ENST00000527486 1297 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.75□□□□□ -1.65
SCN1BQ07699 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC022884.2-201ENST00000578535 580 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC090312.1-201ENST00000580637 348 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.75□□□□□ -1.65
SCN1BQ07699 VN1R84P-201ENST00000593697 235 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN1BQ07699 TAS2R6P-201ENST00000605022 826 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AL023583.1-201ENST00000607518 1143 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 AL512506.1-201ENST00000613918 449 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SCN1BQ07699 AL596275.2-207ENST00000641188 675 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 AL353743.4-201ENST00000422653 1547 ntBASIC4.75□□□□□ -1.65
SCN1BQ07699 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SCN1BQ07699 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SCN1BQ07699 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SCN1BQ07699 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN1BQ07699 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms