Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 Z99496.1-201ENST00000469424 1477 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC110373.1-201ENST00000505994 3505 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC119744.1-201ENST00000454746 1715 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC026523.2-201ENST00000625039 7739 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX6-1P78426 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 MIR130B-202ENST00000385018 82 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 PAICSP7-201ENST00000419829 962 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 MRPS36P1-201ENST00000421291 307 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC234781.2-201ENST00000426370 994 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 RPL23AP76-201ENST00000441860 458 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 MTCO2P25-201ENST00000447065 681 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC116353.3-201ENST00000511215 249 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 TCP11X3P-202ENST00000514289 1254 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 IGHV1-14-201ENST00000523391 241 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 OR4C2P-201ENST00000530855 1064 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC090022.1-201ENST00000546569 311 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC007956.1-201ENST00000555623 542 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 DUXAP1-201ENST00000556632 463 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC002400.1-201ENST00000569310 726 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX6-1P78426 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AL031281.1-201ENST00000604049 488 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AP003973.1-201ENST00000604639 691 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AL158042.1-201ENST00000605338 460 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC080013.6-201ENST00000606185 215 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AC084782.3-201ENST00000612282 578 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AC009318.3-201ENST00000616916 503 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 AL512506.2-201ENST00000624472 458 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 AF001550.2-201ENST00000636643 217 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX6-1P78426 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX6-1P78426 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 AL513185.3-201ENST00000433335 1300 ntBASIC5.41□□□□□ -1.54
NKX6-1P78426 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX6-1P78426 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX6-1P78426 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX6-1P78426 AC232271.1-201ENST00000602455 2715 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX6-1P78426 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.4□□□□□ -1.54
NKX6-1P78426 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX6-1P78426 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX6-1P78426 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.4□□□□□ -1.54
NKX6-1P78426 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX6-1P78426 MTCO1P7-201ENST00000419523 1542 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 WDR95P-201ENST00000425638 1542 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX6-1P78426 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX6-1P78426 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.4□□□□□ -1.54
NKX6-1P78426 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX6-1P78426 RNA5SP478-201ENST00000364657 115 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NKX6-1P78426 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NKX6-1P78426 RNU4-72P-201ENST00000410754 173 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 RN7SKP166-201ENST00000410812 305 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX6-1P78426 AL139421.1-201ENST00000423010 169 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX6-1P78426 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX6-1P78426 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX6-1P78426 GAPDHP48-201ENST00000436626 961 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 CUBNP2-201ENST00000443534 1139 ntBASIC5.4□□□□□ -1.54
NKX6-1P78426 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX6-1P78426 HIGD1AP16-201ENST00000450986 258 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms