Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC023490.2-201ENST00000359859 470 ntBASIC5.2□□□□□ -1.58
RAE1P78406 RNA5SP46-201ENST00000362370 120 ntBASIC5.2□□□□□ -1.58
RAE1P78406 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 Y_RNA.472-201ENST00000384322 102 ntBASIC5.2□□□□□ -1.58
RAE1P78406 RNU6-452P-201ENST00000384406 107 ntBASIC5.2□□□□□ -1.58
RAE1P78406 RNU6-185P-201ENST00000384421 107 ntBASIC5.2□□□□□ -1.58
RAE1P78406 ATP5F1P2-201ENST00000398143 760 ntBASIC5.2□□□□□ -1.58
RAE1P78406 BMS1P17-202ENST00000416720 316 ntBASIC5.2□□□□□ -1.58
RAE1P78406 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AC234781.4-201ENST00000419384 244 ntBASIC5.2□□□□□ -1.58
RAE1P78406 RPL34P3-201ENST00000421454 338 ntBASIC5.2□□□□□ -1.58
RAE1P78406 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 IPPKP1-201ENST00000422501 768 ntBASIC5.2□□□□□ -1.58
RAE1P78406 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 EEF1A1P39-201ENST00000440791 250 ntBASIC5.2□□□□□ -1.58
RAE1P78406 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RAE1P78406 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 AC084754.1-201ENST00000463466 464 ntBASIC5.2□□□□□ -1.58
RAE1P78406 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 AC021193.1-201ENST00000511607 420 ntBASIC5.2□□□□□ -1.58
RAE1P78406 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.2□□□□□ -1.58
RAE1P78406 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 AC021171.1-201ENST00000603137 706 ntBASIC5.2□□□□□ -1.58
RAE1P78406 AC013468.1-201ENST00000608680 598 ntBASIC5.2□□□□□ -1.58
RAE1P78406 AC008115.3-201ENST00000614874 549 ntBASIC5.2□□□□□ -1.58
RAE1P78406 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 uc_338.7-201ENST00000621834 124 ntBASIC5.2□□□□□ -1.58
RAE1P78406 AC112694.2-201ENST00000623697 768 ntBASIC5.2□□□□□ -1.58
RAE1P78406 CU639417.4-201ENST00000623928 207 ntBASIC5.2□□□□□ -1.58
RAE1P78406 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 AC012321.1-201ENST00000561622 1588 ntBASIC5.2□□□□□ -1.58
RAE1P78406 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.2□□□□□ -1.58
RAE1P78406 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 AC073055.1-201ENST00000456901 1621 ntBASIC5.19□□□□□ -1.58
RAE1P78406 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 MTCO1P15-201ENST00000529569 1526 ntBASIC5.19□□□□□ -1.58
RAE1P78406 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 RNU4-92P-201ENST00000363783 136 ntBASIC5.19□□□□□ -1.58
RAE1P78406 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 RNU6-532P-201ENST00000384318 107 ntBASIC5.19□□□□□ -1.58
RAE1P78406 RNU6-1242P-201ENST00000391052 103 ntBASIC5.19□□□□□ -1.58
RAE1P78406 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 HMGB3P18-201ENST00000406327 590 ntBASIC5.19□□□□□ -1.58
RAE1P78406 RNA5SP498-201ENST00000411342 120 ntBASIC5.19□□□□□ -1.58
RAE1P78406 OR6E1P-201ENST00000414424 923 ntBASIC5.19□□□□□ -1.58
RAE1P78406 BTF3P8-201ENST00000414577 526 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC246680.2-201ENST00000422106 389 ntBASIC5.19□□□□□ -1.58
RAE1P78406 DPY19L1P2-201ENST00000426647 915 ntBASIC5.19□□□□□ -1.58
RAE1P78406 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAE1P78406 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.19□□□□□ -1.58
RAE1P78406 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.19□□□□□ -1.58
RAE1P78406 AL353093.1-201ENST00000441292 436 ntBASIC5.19□□□□□ -1.58
RAE1P78406 HMGB3P6-201ENST00000444896 598 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC073109.1-201ENST00000445066 978 ntBASIC5.19□□□□□ -1.58
RAE1P78406 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.19□□□□□ -1.58
RAE1P78406 RBMY2TP-201ENST00000451162 947 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC094085.1-201ENST00000468914 584 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC007998.1-201ENST00000474156 672 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC011037.1-201ENST00000483964 558 ntBASIC5.19□□□□□ -1.58
RAE1P78406 AC004815.1-201ENST00000484185 331 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms