Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PNRC2P1-201ENST00000423940 420 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 RPS4XP16-201ENST00000427198 791 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 AL772161.1-201ENST00000439130 476 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 RNU6-599P-201ENST00000459383 107 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 RNU6-1193P-201ENST00000459461 107 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 IGBP1P4-201ENST00000503202 879 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 AC002456.2-201ENST00000509356 380 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN2P57739 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 HMGN1P9-201ENST00000515212 298 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 AP001922.4-201ENST00000526967 290 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN2P57739 AC093799.2-201ENST00000610062 578 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 AL049539.1-201ENST00000611964 459 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 RNU6-368P-201ENST00000620928 107 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 RNU6-538P-201ENST00000622329 107 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN2P57739 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN2P57739 AP003485.1-201ENST00000625093 753 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 AL353662.3-201ENST00000625131 237 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN2P57739 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
CLDN2P57739 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CLDN2P57739 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN2P57739 ZNF402P-201ENST00000404435 3100 ntBASIC5.18□□□□□ -1.58
CLDN2P57739 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN2P57739 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CLDN2P57739 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN2P57739 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CLDN2P57739 HSPD1P11-201ENST00000508643 1702 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN2P57739 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLDN2P57739 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN2P57739 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN2P57739 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
CLDN2P57739 RN7SKP104-201ENST00000362605 328 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RNA5SP90-201ENST00000364801 99 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RNA5SP455-201ENST00000365190 119 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AP002784.2-201ENST00000397300 549 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLDN2P57739 RNU2-22P-201ENST00000411266 212 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 VN1R51P-201ENST00000411675 945 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN2P57739 GJA6P-201ENST00000415117 1042 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AL133482.1-201ENST00000415988 498 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RBMY2KP-201ENST00000418221 992 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC008173.1-201ENST00000418901 264 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN2P57739 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN2P57739 AC138761.5-201ENST00000433967 325 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RPS29P10-201ENST00000439197 166 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 ARAFP2-201ENST00000440565 559 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN2P57739 AC069540.1-201ENST00000446320 988 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN2P57739 CYCSP42-201ENST00000450823 238 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 HSPE1P22-201ENST00000456856 327 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC079168.1-201ENST00000458741 345 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN2P57739 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN2P57739 HAUS1P1-201ENST00000505275 832 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN2P57739 GLUD1P3-202ENST00000508551 200 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN2P57739 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN2P57739 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RNU6-1308P-201ENST00000516817 103 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.17□□□□□ -1.58
CLDN2P57739 OR5AZ1P-201ENST00000527448 943 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AP000916.1-201ENST00000533869 835 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 HMGN2P47-201ENST00000559378 272 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN2P57739 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CLDN2P57739 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN2P57739 AC008507.2-201ENST00000588402 1176 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC096947.1-201ENST00000603233 470 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RPAP2P1-201ENST00000603626 1168 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AL162431.4-201ENST00000604674 411 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC012557.1-201ENST00000607115 611 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AL135786.2-201ENST00000608422 615 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC245100.7-201ENST00000609678 442 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RNU6-1192P-201ENST00000612197 107 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 EIF3FP1-201ENST00000613970 806 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 RNU6-489P-201ENST00000618289 107 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC010608.3-201ENST00000625048 527 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CLDN2P57739 AC135068.12-201ENST00000637370 931 ntBASIC5.17□□□□□ -1.58
CLDN2P57739 AC099654.8-201ENST00000637757 681 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms